Pairwise Alignments

Query, 436 a.a., diaminopimelate decarboxylase from Methanococcus maripaludis S2

Subject, 518 a.a., Orn/DAP/Arg family decarboxylase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  127 bits (318), Expect = 1e-33
 Identities = 118/453 (26%), Positives = 199/453 (43%), Gaps = 54/453 (11%)

Query: 12  DGGNLKIDGHDASKLASTYGTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYK 71
           + G L + G  A  LA+ YGTPL V+ E    K     V   +   +       ++++YK
Sbjct: 16  EDGVLTVGGASAVALAAAYGTPLLVVDE----KALRAKVAEVRAVLDDELPGARLTYSYK 71

Query: 72  ANTNLAVTRLLSKLGCGADIVSAGELYIAKLSDVPSEKIVFNGNCKLKEEIKMGIEAEIR 131
            N    + R+L   G GA+ +SA E ++A+   VP E++++NG  K  E + M + A   
Sbjct: 72  TNCIPGILRVLHDAGVGAEAISAYEYWLAQSLGVPGEQLIYNGVDKSPESLAMAV-AHGA 130

Query: 132 AFNVDSISELVLINETAKEMGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESG-- 189
             N+D+  E+  +  TA+  G++A +  R+  N  A             +FGLD +S   
Sbjct: 131 LINIDNRDEVDAVLATARAQGRVARIGLRLGLNRSA-------------QFGLDPDSAEG 177

Query: 190 ---IALETIKMAEKMENVKIVGIHCHIGSQLTYISPFVEEARKIMDFV-VLLKNEGIKIR 245
              IA    +     E+  +  +H ++ S   +    V      +D +  L +  G+ IR
Sbjct: 178 DGDIAHVVARCKAHPEHASLEALHFNVTSNARHSGYHVRCLALALDVMRTLARVHGVHIR 237

Query: 246 DVNLGGGLGIPYDKNTK-------------------IPVQ------KDLSKAVLDVIYEY 280
            +++GGG G+   KN                      P Q      +D+  A L   Y  
Sbjct: 238 LLDVGGGFGVQTSKNMSGVEYGLYRLFGVAPGGAWLDPFQDFRLYIRDM--AALLTSYCR 295

Query: 281 EGKIELPNLILEPGRSLVATAGVLLGTVEHVKETPVAK-WVMIDAGMNDMMRPAIYESYH 339
           +  +  P + LEPGR L + A +LL  V+ VKE P A+ + + D G      P  +E + 
Sbjct: 296 DNALPQPVVCLEPGRLLTSGAELLLTRVKAVKERPGAEPFAITDGGRLSQAYPCDFEWHE 355

Query: 340 EITPCTIRAE-KEVVSVAGGLCESSDVFGKDREISKMEVKDTVAILDVGAYGISMANNYN 398
                 +R       +V G +C  SD   + + + ++   D +A+LD GAY  S A N+ 
Sbjct: 356 AFLANDLRRPLARAYTVTGRVCTRSDWLYRGKVMPELASGDILAVLDAGAYFSSYAMNF- 414

Query: 399 SRGKPAMILTNEKEVSLIRARETLADLISKDIV 431
           +  + A++   +    ++R RET   L + D V
Sbjct: 415 AFPRAAVVGVEDGRARVMRHRETFRHLTAMDEV 447