Pairwise Alignments

Query, 436 a.a., diaminopimelate decarboxylase from Methanococcus maripaludis S2

Subject, 412 a.a., diaminopimelate decarboxylase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  296 bits (759), Expect = 6e-85
 Identities = 170/413 (41%), Positives = 245/413 (59%), Gaps = 15/413 (3%)

Query: 14  GNLKIDGHDASKLASTYGTPLYVMSETQTVKNFTRYVESFKEYSEKTGKEFIISFAYKAN 73
           G+L  +      LASTYGTPLYV S     +++  +  +F + +  T       F+ KA 
Sbjct: 9   GSLFAEDVSIIDLASTYGTPLYVYSAGTLERHYRAFDSAFGKAAHLT------CFSVKAC 62

Query: 74  TNLAVTRLLSKLGCGADIVSAGELYIAKLSDVPSEKIVFNGNCKLKEEIKMGIEAEIRAF 133
           +N+ + +LL  LG G DIVS GEL+ A L+ +P  +IV++G  K  +EI+  +EA+I  F
Sbjct: 63  SNIHILKLLGSLGAGVDIVSGGELHRALLAGIPGRRIVYSGVGKRPDEIRSALEADILMF 122

Query: 134 NVDSISELVLINETAKEMGKIANVAFRVNPNVDAKTHPKISTGMKKNKFGLDIESGIALE 193
           NV+S+ EL  I E A  MG  A V+ R+NP+VD  THP ISTG++KNKFG+++    ALE
Sbjct: 123 NVESLQELRTIEEVAASMGTTARVSLRINPDVDPHTHPYISTGLQKNKFGIEMTQ--ALE 180

Query: 194 TIKMAEKMENVKIVGIHCHIGSQLTYISPFVEEARKIMDFVVLLKNEGIKIRDVNLGGGL 253
              +A  + ++  +GI CHIGSQLT +SPF+E   K+++F   L   G+ I  ++LGGGL
Sbjct: 181 GYMLARDLPHIDPIGIDCHIGSQLTSLSPFLEALDKVLEFREHLSILGLDISYLDLGGGL 240

Query: 254 GIPYDKNTKIPVQKDLSKAVLDVIYEYEGKIELPNLILEPGRSLVATAGVLLGTVEHVKE 313
           GI Y + T  P  +D  +AVL    E    + L  L+LEPGR +   AG+L+  V + K 
Sbjct: 241 GITYGEETP-PHPRDFGRAVL----ERTKGLNL-TLVLEPGRVIAGNAGILVTEVLYTKT 294

Query: 314 TPVAKWVMIDAGMNDMMRPAIYESYHEITPCTIRAEKE-VVSVAGGLCESSDVFGKDREI 372
           TP  ++V++DA MND++RP++Y SYH I         E  V V G +CES D   +DR +
Sbjct: 295 TPSKQFVIVDAAMNDLVRPSLYASYHRIAEVLPHGRTEQTVDVVGPICESGDFLARDRVL 354

Query: 373 SKMEVKDTVAILDVGAYGISMANNYNSRGKPAMILTNEKEVSLIRARETLADL 425
             +E  + +A+   GAYG SM++ YNSR + A +L        IR RET  DL
Sbjct: 355 PAVEQGELLAVFSAGAYGFSMSSQYNSRPRAAEVLVRGDTAKSIRRRETYDDL 407