Pairwise Alignments

Query, 284 a.a., winged helix-turn-helix transcriptional regulator from Methanococcus maripaludis S2

Subject, 243 a.a., Phosphate uptake regulator, PhoU (NCBI) from Rhodospirillum rubrum S1H

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 21/204 (10%)

Query: 72  DRYFKEIYETFDRMGTNVIQNIDNVFDSLKTHDLDIAKSIILEDYALNRMEDEVN-LVIK 130
           D   K + +T  RMG      + N   +L   D D+A  ++  D  ++ +E E+N   I+
Sbjct: 11  DEELKTLVKTVLRMGGLAEAQLANAVQALVRRDSDLAGRVVSGDGRIDAIEQEINDFAIR 70

Query: 131 MKASKYM---DMNSLMQVSNIAANIERCGDYLSNIAEEV--------VNGLLVDPTINKE 179
           M A +     D+  ++    I++++ER GDY SN+ +          V  +   PT+ + 
Sbjct: 71  MLALRQPMADDLRGIVGALKISSDLERIGDYASNVGKRTLVLNQLAPVKPVTTIPTMARL 130

Query: 180 VFE-IKEIISKMFTHAMN-MVKSKTIETEIYELEGNLHKKLDTIMEKIAEHPDENLKDIN 237
           V + +K+ +       ++  V + + + E+ EL  +L ++L T M        E+ + I 
Sbjct: 131 VQDMVKDTLDAYVERDLDKAVMAWSRDDEVDELYTSLFRELVTYMM-------EDPRTIT 183

Query: 238 QFIQFGMFLKDVERFGDRCLKIFE 261
                    K++ER GD    I E
Sbjct: 184 ACTHLMFIAKNIERIGDHATNIAE 207



 Score = 28.5 bits (62), Expect = 1e-04
 Identities = 13/19 (68%), Positives = 15/19 (78%)

Query: 148 IAANIERCGDYLSNIAEEV 166
           IA NIER GD+ +NIAE V
Sbjct: 191 IAKNIERIGDHATNIAETV 209