Pairwise Alignments

Query, 284 a.a., winged helix-turn-helix transcriptional regulator from Methanococcus maripaludis S2

Subject, 236 a.a., phosphate transport system protein PhoU from Phaeobacter inhibens DSM 17395

 Score = 57.8 bits (138), Expect = 2e-13
 Identities = 45/199 (22%), Positives = 93/199 (46%), Gaps = 10/199 (5%)

Query: 72  DRYFKEIYETFDRMGTNVIQNIDNVFDSLKTHDLDIAKSIILEDYALNRMEDEVN----L 127
           DR  + I     +MG  V   I +   +L+T D ++A+ +   D A++ +E+ +N     
Sbjct: 11  DRDLEAIQAQIMKMGGLVEAAIMDAARALETRDEELAQQVRQGDKAIDGLEELINEEAAR 70

Query: 128 VIKMKASKYMDMNSLMQVSNIAANIERCGDYLSNIAEEVVNGLLVDPTINKEVFEIKEI- 186
           VI ++A   +D+  ++ V  I+ N+ER GDY  NIA+     L   P +++    ++ + 
Sbjct: 71  VIAIRAPAAVDLRLVLSVMKISGNLERIGDYAKNIAKRTA-VLAQGPNVSESAAAMRRMA 129

Query: 187 --ISKMFTHAMNMVKSKTIE--TEIYELEGNLHKKLDTIMEKIAEHPDENLKDINQFIQF 242
             +  M   A++    + +E   ++   + ++ +  + +  +      E+ ++I   +  
Sbjct: 130 REVELMLKDALDSYIQRDVELAQDVIARDRDVDQMYNALFREFLTFMMEDPRNITPCMHL 189

Query: 243 GMFLKDVERFGDRCLKIFE 261
               K+VER GD    I E
Sbjct: 190 HFIAKNVERMGDHVTSIAE 208



 Score = 38.9 bits (89), Expect = 1e-07
 Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 84  RMGTNVIQNIDNVFDSLKTHDLDIAKSIILEDYALNRMEDEVN---LVIKMKASKYMDMN 140
           RM   V   + +  DS    D+++A+ +I  D  +++M + +    L   M+  +  ++ 
Sbjct: 127 RMAREVELMLKDALDSYIQRDVELAQDVIARDRDVDQMYNALFREFLTFMMEDPR--NIT 184

Query: 141 SLMQVSNIAANIERCGDYLSNIAEEVV 167
             M +  IA N+ER GD++++IAE+VV
Sbjct: 185 PCMHLHFIAKNVERMGDHVTSIAEQVV 211