Pairwise Alignments

Query, 284 a.a., winged helix-turn-helix transcriptional regulator from Methanococcus maripaludis S2

Subject, 284 a.a., winged helix-turn-helix transcriptional regulator from Methanococcus maripaludis JJ

 Score =  554 bits (1427), Expect = e-163
 Identities = 279/284 (98%), Positives = 280/284 (98%)

Query: 1   MLRGKDATLAAIINIILDEEPETQDDIADRLGVSRRYVAKLLKPLVDGGAIMHPYVVNLE 60
           MLRGKDATLAAIINIILDEEPETQDDIADRLGVSRRYVAKLLKPLVDGGAIMHPYVVNLE
Sbjct: 1   MLRGKDATLAAIINIILDEEPETQDDIADRLGVSRRYVAKLLKPLVDGGAIMHPYVVNLE 60

Query: 61  KLKEFEEYIETDRYFKEIYETFDRMGTNVIQNIDNVFDSLKTHDLDIAKSIILEDYALNR 120
           KLKEFEEYIETDRYFKEIYETFDRMGTNVIQNID VFDSLKTHDLDIAKSIILEDYALNR
Sbjct: 61  KLKEFEEYIETDRYFKEIYETFDRMGTNVIQNIDKVFDSLKTHDLDIAKSIILEDYALNR 120

Query: 121 MEDEVNLVIKMKASKYMDMNSLMQVSNIAANIERCGDYLSNIAEEVVNGLLVDPTINKEV 180
           MEDEVNLVIKMKASKYMDMNSLMQVSNIAANIERCGDYLSNIAEEVVNGLLVDP I KEV
Sbjct: 121 MEDEVNLVIKMKASKYMDMNSLMQVSNIAANIERCGDYLSNIAEEVVNGLLVDPAIKKEV 180

Query: 181 FEIKEIISKMFTHAMNMVKSKTIETEIYELEGNLHKKLDTIMEKIAEHPDENLKDINQFI 240
           FEIKEIISKMF HAMNMVKSKTIETEIYELEGNLHKKLDT+MEKIAEHPDENLKDINQFI
Sbjct: 181 FEIKEIISKMFAHAMNMVKSKTIETEIYELEGNLHKKLDTMMEKIAEHPDENLKDINQFI 240

Query: 241 QFGMFLKDVERFGDRCLKIFELGREFHHNIPKNVTTPEYVRNLK 284
           QFGMFLKDVERFGDRCLKIFELGREFHHNIPKNVTTPEYVRNLK
Sbjct: 241 QFGMFLKDVERFGDRCLKIFELGREFHHNIPKNVTTPEYVRNLK 284