Pairwise Alignments

Query, 254 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 279 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component from Pseudomonas stutzeri RCH2

 Score =  228 bits (581), Expect = 1e-64
 Identities = 116/254 (45%), Positives = 167/254 (65%), Gaps = 11/254 (4%)

Query: 4   LELKNLIKKFGNGKKDLVAVDNVDLSVNHNEFVSIVGPSGCGKSTILRMIAGLETPSSGG 63
           + ++ + K F + ++++ A+ ++DL +  NEFV+ VG SGCGKST+LR+IAGLET S G 
Sbjct: 6   IRVRQVGKTFASERREVQALQSIDLDIQPNEFVTFVGASGCGKSTLLRIIAGLETLSRGE 65

Query: 64  IYLDEKEVLGPDADRGMVFQQYTLLPWKTVLQNVTFGLEIKKIPKEQRIE--------IA 115
           I LD + + GP  DR MVFQ Y+L PW TV+QN+ F  ++K I    R +         A
Sbjct: 66  ILLDGRPIDGPGVDRAMVFQHYSLYPWLTVMQNIKFCRQLKVIGNTVRHDGDVESAAGRA 125

Query: 116 KKFIKMVGLEEFCDSYPYELSGGMQQRVAIARTLANNPKIVLMDEPFGALDTQTRAVLQD 175
              + ++GL  F D+YP +LSGGMQQRVAIAR L   P  +LMDEPFGALD QTR V+ D
Sbjct: 126 DALLNLMGLTRFADAYPSQLSGGMQQRVAIARALLPKPATLLMDEPFGALDAQTREVMHD 185

Query: 176 HLLKIWQTEKKTVVFVTHSVDEAVYLSDRVVVMTARPGKIKSIIDIDLDRPR---KRTSP 232
            +  + + EK T++FVTH V+EA+YL  R+V+M  RPG+I S+ ++ L   R    + +P
Sbjct: 186 LIRHVHRLEKSTILFVTHDVEEAIYLGSRIVLMAPRPGRIDSVYEVPLPAQRHQDMKLAP 245

Query: 233 EFTKYKKMIIDELK 246
           EFT+ K+ I+  ++
Sbjct: 246 EFTELKREILARIR 259