Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 314 a.a., Alkanesulfonates transport system permease protein from Pseudomonas fluorescens FW300-N2E2

 Score =  134 bits (338), Expect = 2e-36
 Identities = 75/246 (30%), Positives = 136/246 (55%), Gaps = 4/246 (1%)

Query: 4   LKNLTLPIIGILAWEALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKR 63
           L  L  PI+ +L WE  + +    +I  +V +  S +      ++ +G L  + +VS++R
Sbjct: 67  LLRLISPIVLLLLWELASRW---GLIPQRVIAAPSQIGGTLWAMIVSGELGRHLLVSLQR 123

Query: 64  VLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMH 123
            L+G  I     +   L+ G       + D+ +++LR IP LA VPL + WFGIGE +  
Sbjct: 124 ALVGLSIGVTIGVFAALISGLTKRGEVVLDSPMQMLRTIPSLALVPLFILWFGIGEFTKI 183

Query: 124 FIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVG 183
            +I IG  FP+ +N  +G++++   +IEAA TLG S ++++  V++P S      GLR  
Sbjct: 184 ALIVIGTTFPVYLNLFAGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLTSFFVGLRYS 243

Query: 184 AGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEK 243
            GI+W+ +V  E +  + AG+GYL   A    + +++V  ++I  ++G+++D  +R +E+
Sbjct: 244 LGISWLALVFVEQI-NTTAGIGYLASDARDFMRTDVIVICLLIYSVLGLLIDGLIRTLER 302

Query: 244 KYFCWK 249
               W+
Sbjct: 303 FALAWR 308