Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 285 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  134 bits (338), Expect = 2e-36
 Identities = 76/243 (31%), Positives = 133/243 (54%), Gaps = 4/243 (1%)

Query: 7   LTLPIIGILAWEALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLI 66
           L  P++ +L WE  +     PV +    S I   L     ++ +G L  +  VS++R L+
Sbjct: 41  LLSPLVLLLLWELASQTGLLPVRVIAAPSQIGGTL---WSMIVSGELAHHLWVSLQRALL 97

Query: 67  GFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFII 126
           G  I  +  +   L+ G       + D+ ++ LR IP LA VPL + WFGIGE +   +I
Sbjct: 98  GLSIGVSIGVVAALVTGLSRRGEIVLDSPMQRLRTIPSLALVPLFILWFGIGEFTKVALI 157

Query: 127 FIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGI 186
            +G  FP+ +N  SG++++   +IEAA TLG S ++++  V++P S P    GLR   GI
Sbjct: 158 VMGTTFPVYLNLFSGIRNIDPKLIEAANTLGLSRRELIWHVILPGSLPAFFVGLRYSLGI 217

Query: 187 AWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEKKYF 246
           +W+ +V  E +  + AG+GYL   A    + +++V  ++I  ++G+++D  +R +E+   
Sbjct: 218 SWLALVFVEQI-NTTAGIGYLASDARDFMRTDVIVICLLIYSVLGLVIDAIIRTLERYAL 276

Query: 247 CWK 249
            W+
Sbjct: 277 AWR 279