Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 266 a.a., sulfonate ABC transporter, permease protein, putative from Synechococcus elongatus PCC 7942

 Score =  134 bits (338), Expect = 1e-36
 Identities = 78/233 (33%), Positives = 132/233 (56%), Gaps = 2/233 (0%)

Query: 11  IIGILAWEALAIYLNNPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLIGFFI 70
           ++G+L W  L     NP  + +  +  S +   G  +L  G L  +   S++RV +G   
Sbjct: 30  LLGLLLWSTLTSAWINPDPVWQAFAPESAIAALGK-LLFNGTLWPHIGASLQRVAVGLLA 88

Query: 71  AGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIFIGA 130
           A A  +P+GLL G   +I       ++ +R I PL+W+P+A+  FGIG+  ++F++ I A
Sbjct: 89  AIAVGVPVGLLFGLVPMIERSASGALQFIRMISPLSWMPIAVMAFGIGDLPVYFLLAIAA 148

Query: 131 FFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIAWMC 190
            +PIL++T SG  +V   ++  A++L  +  + ++ +V+PA  P IL G+R+  G  W+ 
Sbjct: 149 VWPILLSTSSGTAAVNHKLLLLARSLCATRSETIRRIVIPAIVPQILVGVRLAIGTIWIV 208

Query: 191 VVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEK 243
           +V AEML G  +GLGY I+        N + A ++ IGIIG  LD  L++++K
Sbjct: 209 LVPAEML-GVSSGLGYFILDTRDRIAYNELTAVLLAIGIIGCALDWSLQFLQK 260