Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 263 a.a., nitrate transport permease from Synechococcus elongatus PCC 7942

 Score =  154 bits (389), Expect = 2e-42
 Identities = 75/190 (39%), Positives = 126/190 (66%), Gaps = 2/190 (1%)

Query: 56  NTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAWF 115
           N ++S++RV IG+ +A   AIPLG+ +G  +L + +F   V+LL+P+ PLAW+P+ L  F
Sbjct: 70  NLLISLRRVAIGYLLATVVAIPLGIAIGMSALASSIFSPFVQLLKPVSPLAWLPIGLFLF 129

Query: 116 GIGESSMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSPD 175
              E +  F+I I + +P LINT  GV +V    ++ +++LG S    +  V++PA+ P 
Sbjct: 130 RDSELTGVFVILISSLWPTLINTAFGVANVNPDFLKVSQSLGASRWRTILKVILPAALPS 189

Query: 176 ILTGLRVGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIILD 235
           I+ G+R+  GIAW+ +VAAEML G+  G+GY I   ++   +  + +++IIIGI+GI+LD
Sbjct: 190 IIAGMRISMGIAWLVIVAAEMLLGT--GIGYFIWNEWNNLSLPNIFSAIIIIGIVGILLD 247

Query: 236 KGLRYIEKKY 245
           +G R++E ++
Sbjct: 248 QGFRFLENQF 257