Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 287 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  137 bits (345), Expect = 2e-37
 Identities = 79/224 (35%), Positives = 133/224 (59%), Gaps = 5/224 (2%)

Query: 26  NPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYY 85
           N +  P +  V+++L      ++ +G L ++  +S++R  IGF +A   A+PLG LMG Y
Sbjct: 61  NALFFPPLSQVLAVLWE----MIVSGQLADHIGISLERAAIGFLLACVTAVPLGFLMGRY 116

Query: 86  SLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIFIGAFFPILINTISGVKSV 145
           SL     D  V+ LR     A +P+ +   GIGE+S   I F  A F +LINTI GVKSV
Sbjct: 117 SLFEKASDFLVQTLRNTSQFALLPVFIIVLGIGEASKIAITFYAAVFFLLINTIVGVKSV 176

Query: 146 PVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIAWMCVVAAEMLPGSDAGLG 205
             ++++AA+++G S  D+ K V+ P++ P I+ G R+G   +   V+AAEML  + +G+G
Sbjct: 177 DPLLVKAARSMGTSDWDLFKKVIFPSAIPSIVAGARLGVKTSLFSVIAAEML-AAQSGIG 235

Query: 206 YLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEKKYFCWK 249
           YLI ++  + + + + A ++ + IIG++L+  L   E++   W+
Sbjct: 236 YLIQHSSLMLETDRMYAGILTLTIIGLLLNYLLVAGERRATRWR 279