Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 281 a.a., aliphatic sulfonate ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  133 bits (334), Expect = 4e-36
 Identities = 76/223 (34%), Positives = 129/223 (57%), Gaps = 5/223 (2%)

Query: 26  NPVILPKVESVISILLNPGVGILGTGNLIENTIVSIKRVLIGFFIAGAFAIPLGLLMGYY 85
           NP + P V +++S L     GI G G L+++  +S++R    F  A   AIPLGLLMG  
Sbjct: 59  NPAVFPSVGAILSALWT---GISG-GALLDDIAISLQRSGTAFVGAVVLAIPLGLLMGQV 114

Query: 86  SLINDLFDTTVELLRPIPPLAWVPLALAWFGIGESSMHFIIFIGAFFPILINTISGVKSV 145
             I +  D  ++L R    LA  P+ +   G+GE+S  F+IF    FP+L++TISGVK V
Sbjct: 115 RAIENALDPVLQLFRQTSALALYPVFILLLGLGEASKVFVIFWATLFPLLLSTISGVKEV 174

Query: 146 PVIMIEAAKTLGGSTKDILKSVVVPASSPDILTGLRVGAGIAWMCVVAAEMLPGSDAGLG 205
              +IE A+  G S   + + VV+P + P I  GLR+ A  A + ++A+EM+ G++ G+G
Sbjct: 175 DSKLIEMARVYGASRLTVFRRVVLPGAVPSIFVGLRLSATTALLLLIASEMI-GANKGIG 233

Query: 206 YLIMYAYSLSKMNIVVASMIIIGIIGIILDKGLRYIEKKYFCW 248
           + +M A    ++ ++ A++ I+  +G++ +  L + +++   W
Sbjct: 234 FQVMNAQYNFQIPLMFAAIFILAGLGLVSNYALVFAQRRLCRW 276