Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 272 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, permease component from Dechlorosoma suillum PS

 Score =  174 bits (441), Expect = 2e-48
 Identities = 98/256 (38%), Positives = 156/256 (60%), Gaps = 15/256 (5%)

Query: 9   LPIIGILAWEALA-IYLNNPVILPKVESVI----SILLN-----PGVGILGT----GNLI 54
           +P++ ++ WEA +   L + V+LP   +V     + LL      PG G   T    G L+
Sbjct: 14  VPVLVLILWEAGSRAGLFSEVLLPSPSAVAVKWWAYLLPTQDYVPGSGSYFTWLISGELL 73

Query: 55  ENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALAW 114
            +   S+ RV++GF I    A+PLGL+MG  + I DLF+  V++LRPIPP+A++PLA+ W
Sbjct: 74  HDAYSSLYRVIVGFIIGAGLALPLGLVMGANNRIYDLFNPLVQILRPIPPIAYIPLAILW 133

Query: 115 FGIGESSMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASSP 174
           FG+G     F+I IGAFFP+L+NTI+GV+ V  I + AA+ LG +   +   V++PAS+P
Sbjct: 134 FGLGNPPSFFLIAIGAFFPVLMNTIAGVRHVDGIYLRAARNLGVNYWTMFTRVILPASTP 193

Query: 175 DILTGLRVGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGIIL 234
            IL G+R+G G A++ V+ +EM+  +D GLG+ I+ A      + ++A MI IG++G+ +
Sbjct: 194 YILAGVRIGIGTAFIVVIVSEMIAVND-GLGFRILEAREFMWSDKIIAGMITIGLLGLAI 252

Query: 235 DKGLRYIEKKYFCWKK 250
           D  +  +      W +
Sbjct: 253 DTAVSRLNNHLLRWHR 268