Pairwise Alignments

Query, 253 a.a., ABC transporter permease from Methanococcus maripaludis S2

Subject, 296 a.a., nitrate ABC transporter, permease protein from Dechlorosoma suillum PS

 Score =  132 bits (333), Expect = 6e-36
 Identities = 73/252 (28%), Positives = 139/252 (55%), Gaps = 13/252 (5%)

Query: 3   ILKNLTLPIIGILAWEAL--AIYLNNPVILPKVE---SVISILLNP----GVGILGTGNL 53
           +LK +  P+IG+  +  L   + + +P +    +   S + +  +P    G   +G G  
Sbjct: 44  VLKVVLPPLIGLAVFVGLWYLVSMTSPQLPGPAKTWASAVQLFADPFYQNGPNDMGIG-- 101

Query: 54  IENTIVSIKRVLIGFFIAGAFAIPLGLLMGYYSLINDLFDTTVELLRPIPPLAWVPLALA 113
             N + S++RV IGF +A    IP G L+G +  +N +    + LLRP+ PLAW+P+ L 
Sbjct: 102 -WNILNSLQRVGIGFGMAALIGIPAGFLLGRFDFLNRMMSPIISLLRPVSPLAWLPIGLL 160

Query: 114 WFGIGESSMHFIIFIGAFFPILINTISGVKSVPVIMIEAAKTLGGSTKDILKSVVVPASS 173
            F     +  ++IFI + +P++INT  GV+ +P   +  A+ L      +   ++ PA  
Sbjct: 161 VFKAANPAAIWVIFISSIWPMIINTAVGVQRIPKDYLNVARVLDLPEWKVFTKILFPAVL 220

Query: 174 PDILTGLRVGAGIAWMCVVAAEMLPGSDAGLGYLIMYAYSLSKMNIVVASMIIIGIIGII 233
           P +LTG+R+  G+AW+ +VAAEML G   GLG+ +   ++   +  ++ ++ ++G++G++
Sbjct: 221 PYMLTGVRLSIGVAWLVIVAAEMLTGG-VGLGFWVWDEWNNLNVEHIIIAIFVVGLVGLL 279

Query: 234 LDKGLRYIEKKY 245
           L++ L  +  ++
Sbjct: 280 LEQALVLLANRF 291