Pairwise Alignments

Query, 692 a.a., ATP-dependent protease LonB from Methanococcus maripaludis S2

Subject, 811 a.a., ATP-dependent protease, putative from Pseudomonas syringae pv. syringae B728a

 Score = 64.3 bits (155), Expect = 2e-14
 Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 8/115 (6%)

Query: 554 LSKKLVSDGTLSIAKAKGEVAKEDLDLAEHEIYIQFSQSYSKIDGDSATAAACLSIISSL 613
           L + + S G + +    G    ++  LA     I   QSY  +DGDSA+     ++IS+L
Sbjct: 608 LGQPIHSKGVMILTGYLGSRYAQEFPLAI-SASIALEQSYGYVDGDSASLGEVCTLISAL 666

Query: 614 LNIPLKQDFCITGSLDLNGEILAIGGVNEKI-------NAAKEYGFKRVIIPQSN 661
              PLKQ F ITGS++  GE+ A+GGVNEKI        A    G +  IIP +N
Sbjct: 667 SRTPLKQCFAITGSINQFGEVQAVGGVNEKIEGFFRLCEARGLTGEQGAIIPHAN 721



 Score = 29.3 bits (64), Expect = 8e-04
 Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 16/105 (15%)

Query: 6   FKTTDELPKPSPNLINQVIGQDEAVKIVLSAVKNKR---HALLLGDPGVGKSMMVKAF-- 60
           F TT EL          V+GQ+ AV+ +   V   R   +  ++G+PG G+   VK +  
Sbjct: 27  FATTHELEP-----FRGVLGQERAVEALQFGVAMPRPGYNVFVMGEPGTGRFSFVKRYLK 81

Query: 61  --GQLLEHSSDFKPYSLIARPNIKNSEKPIVDLIEGRMIEETAQI 103
             G+ ++  SD+   +    P     E   ++L  G   E TA I
Sbjct: 82  AEGKRMQTPSDWVYVNNFDEPR----EPKALELPPGTAHEFTADI 122