Pairwise Alignments

Query, 692 a.a., ATP-dependent protease LonB from Methanococcus maripaludis S2

Subject, 800 a.a., putative ATP-dependent protease La-relatedprotein (RefSeq) from Shewanella loihica PV-4

 Score = 66.6 bits (161), Expect = 4e-15
 Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 12/129 (9%)

Query: 545 KHSITLASALSKKLVSDGTLSIAKAKGEVAKEDLDLAEHEIYIQFSQSYSKIDGDSATAA 604
           +  + L   +  K V   T  +A   G+  K  + L  H   + F Q+YS +DGDSA+ A
Sbjct: 605 ERKVELGGQIHSKGVMILTAYLATIFGQTDK--IPLTTH---LTFEQNYSGVDGDSASMA 659

Query: 605 ACLSIISSLLNIPLKQDFCITGSLDLNGEILAIGGVNEKI----NAAKEYGFKR---VII 657
              +I+S+   +PL+QD  ITGS++  G+   IGGVNEKI    +  K  G  +   VII
Sbjct: 660 ELCAIVSAFAKVPLRQDVAITGSMNQFGQAQPIGGVNEKIEGFFDVCKIKGRHKGQGVII 719

Query: 658 PQSNFEDVI 666
           P++N ++++
Sbjct: 720 PRTNVQNLM 728



 Score = 46.6 bits (109), Expect = 5e-09
 Identities = 37/164 (22%), Positives = 79/164 (48%), Gaps = 7/164 (4%)

Query: 232 GAIHEAHKGILYVDEIKTMPVD-VQDYILTALQDKQLAISG--RNPNSSGA-SVETNPIP 287
           G++H+A+ G+L +D IK +    V D +  AL+ ++L++S   R    SG  S++   IP
Sbjct: 356 GSLHKANGGVLMIDAIKVLEQPYVWDGLKRALRSRKLSLSSLEREVTLSGTISLDPEAIP 415

Query: 288 CDLTLIMSGNMDDASNLR---APLLDRIDYKVVLKNKMDNNQENRDKLLQFIVQELENNN 344
            D+ +I+ G+      L+       +        +++M     +  +  +FI   +  N 
Sbjct: 416 LDVKIILFGDYQTYQLLQHYDPEFKELFRVTADFEDEMPRTDASEVQYAKFISSIVVGNK 475

Query: 345 LRPMSYEACCEIVRMAQLLSGSKNKLTLRLRQLSNIIKMANDIA 388
           +      A   I+  +   + ++NKL+L    ++N+++ +N +A
Sbjct: 476 MLHCDRGAIKRIIEFSARQADAQNKLSLHSADIANLLRESNYVA 519