Pairwise Alignments

Query, 692 a.a., ATP-dependent protease LonB from Methanococcus maripaludis S2

Subject, 569 a.a., ATP-dependent protease (RefSeq) from Shewanella loihica PV-4

 Score = 64.7 bits (156), Expect = 1e-14
 Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 18/171 (10%)

Query: 502 IGVIHGLAVLGADGLGDVTKIITKIVKSKHPRTNLLNISGDLAKHSITLASALSKKLVSD 561
           IG I+GL VL A           +    +  R       GD     I   S L   + + 
Sbjct: 328 IGQINGLTVLDA----------AEYTYGEPARITAAVHYGDGEVADIERKSELGGNIHAK 377

Query: 562 GTLSIAKAKGEVAKEDLDLAEHEIYIQFSQSYSKIDGDSATAAACLSIISSLLNIPLKQD 621
           G + +      +  +D  L      I F QSY +IDGDSA+ A   +++S++   P++Q 
Sbjct: 378 GLMILTSCLYRIFGKDAPL-HLNANIVFEQSYQEIDGDSASLAEYCALMSAIAEQPIEQG 436

Query: 622 FCITGSLDLNGEILAIGGVNEKINAAKEY-------GFKRVIIPQSNFEDV 665
              TG++D  G++ AIGGVNEKI    +        G + VIIP SN + +
Sbjct: 437 IAATGAIDQFGQVQAIGGVNEKIEGFFDLCQRRGLTGTQGVIIPASNVQQL 487