Pairwise Alignments

Query, 692 a.a., ATP-dependent protease LonB from Methanococcus maripaludis S2

Subject, 806 a.a., ATP-dependent protease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  111 bits (277), Expect = 2e-28
 Identities = 110/449 (24%), Positives = 197/449 (43%), Gaps = 90/449 (20%)

Query: 232 GAIHEAHKGILYVDEIKTMPVD-VQDYILTALQDKQLAISG--RNPNSSGA-SVETNPIP 287
           G++H+A+ G+L +D IK +    V D +  AL+ ++L +S   R  + SG  S+   PIP
Sbjct: 362 GSLHKANGGVLLMDAIKVLERPYVWDGLKRALRSRKLDLSSLEREVSLSGTISLAPEPIP 421

Query: 288 CDLTLIMSGNMDDASNLR---APLLDRIDYKVVLKNKMDNNQENRDKLLQFIVQELENNN 344
            D+ +I+ G+ +    L+   A  ++        ++ MD +  +     +FI   + +NN
Sbjct: 422 LDVKIILFGDHETYQLLQHYDADFIELFRVTADFEDVMDRSDASEAHYARFISSIVHDNN 481

Query: 345 LRPMSYEACCEIVRMAQLLSGSKNKLTLRLRQLSNIIKMANDIATGKELSESIEEMSEKE 404
           +      A   I+  +   +  + KL+L    ++N+++ +N  A         + +S K 
Sbjct: 482 MLHCDRSAIARIIEYSSREAQDQQKLSLHSANIANLLRESNFCA---------KAVSSKR 532

Query: 405 VKPEVTVKAVKPAEKKNTRKIRAVVGKLKPKKSEEVIKEVKPVSKAPVLEKDDRVIELDH 464
           ++ +   +A+K  +K+        V +L     E        V+   ++   D+V+    
Sbjct: 533 IEKQHVEQALKNQQKR--------VSRLHDNIMESF------VNGTTLINTHDKVV--GQ 576

Query: 465 INEIISTGIYSMSKQVAIDYLKNFKRYKNIVSNDKPKIGVIHGLAVLGADGLGDVTKIIT 524
           IN +                        ++VS  + + G+ + +    A G G+V  I  
Sbjct: 577 INAL------------------------SVVSTSEHQFGLPNRITATTAYGKGEVLDI-- 610

Query: 525 KIVKSKHPRTNLLNISGDLAKHSITLASALSKKLVSDGTLSIAKAKGEVAKEDLDLAEHE 584
                               +H + L   +  K V   T  +A   G+ A+  L      
Sbjct: 611 --------------------EHRVKLGGRIHSKGVLILTAYLASVLGKTAQIPLTT---- 646

Query: 585 IYIQFSQSYSKIDGDSATAAACLSIISSLLNIPLKQDFCITGSLDLNGEILAIGGVNEKI 644
            Y+ F QSYS +DGDSA+ A C +IIS++  +PL+QD  ITGS++  GE   IGGVNEKI
Sbjct: 647 -YLTFEQSYSGVDGDSASMAECCAIISAISELPLRQDIAITGSMNQFGEAQPIGGVNEKI 705

Query: 645 NAAKEY-------GFKRVIIPQSNFEDVI 666
               +          + VIIP+SN  +++
Sbjct: 706 EGFFDVCQIKGRTSSQGVIIPESNIANLM 734