Pairwise Alignments

Query, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 336 a.a., ABC transporter (iron.B12.siderophore.hemin) , permease component from Pseudomonas fluorescens FW300-N2E2

 Score =  202 bits (514), Expect = 1e-56
 Identities = 116/331 (35%), Positives = 192/331 (58%), Gaps = 20/331 (6%)

Query: 25  ALIIIS-IYSLCTGDFQLSISQI----INSLLGSGDA----SSNLVIWNIRLPRIFAAIL 75
           AL+++S + SL  G  ++ ++ +    +N   G G A        ++W IR+PR+    L
Sbjct: 15  ALLLVSCVVSLGFGPARVPVAVVWDILLNKAFGVGSAYWSPGQEHIVWLIRVPRLLLGAL 74

Query: 76  CGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGGAESTGHIAINNPY 135
            G GL++ GAV+Q V RNPLA P+ +G++ GA  GA + ++ +G    E  G +      
Sbjct: 75  VGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHVG----EIVGLL------ 124

Query: 136 SITIFAFLGSLLGVCAVLILAKLKG-LSPEAMVLAGVAISSLFTAATTLIQYFADDMQLA 194
           ++ + AF+G+LL +  VL +A  +G L  + ++L GVA+S +  AA  L+ +  D    +
Sbjct: 125 TLPLAAFIGALLSMLLVLTIAARQGRLESDRLLLCGVAVSFVMMAAANLLLFLGDHRASS 184

Query: 195 AMVYWSFGDLGRPLWPEVKIMAFVAFVSLIYFIHKRWDYNALESGEETAKSLGVNTDKIR 254
           A+++W  G LG   W  + + A    + L+  +      NAL +GE+TA +LG+N  K+R
Sbjct: 185 AVMFWMLGGLGLARWELLAVPAASVVLGLVLLLGMARPLNALMAGEQTAVTLGLNAAKVR 244

Query: 255 LSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPLCSIFGAVLVLLADT 314
           L   L+ASL+T V V+  G IGFVGL+ PHI R  VG ++R L+P C + G++ ++  D 
Sbjct: 245 LWIFLIASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPACVLLGSLFLVWVDV 304

Query: 315 IARTIISPIILPVGILTSFLGAPMFLYLLTK 345
            ART+I+P  LP+G+ T+ +G   F+ L+ +
Sbjct: 305 AARTLIAPEDLPIGVATAAIGGLFFIGLMRR 335