Pairwise Alignments

Query, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 340 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  186 bits (471), Expect = 1e-51
 Identities = 114/332 (34%), Positives = 183/332 (55%), Gaps = 19/332 (5%)

Query: 21  VLIIALIIISIYSLCTGDFQLSISQIINSLLGSG---DASSNLVIWNIRLPRIFAAILCG 77
           VL++A++I +     +   Q+    + N L  +    D     ++WN RL R   A  CG
Sbjct: 16  VLVLAIMIGAAIGETSISLQVVFQVLANKLWAASYVLDPIDEGIVWNYRLTRAIVAAACG 75

Query: 78  IGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGAC-VAIITLGIGGAESTGHIAINNPYS 136
            GL++ G V+Q +LRNPLA PY +GIS GA  GA  VAI+  G G              S
Sbjct: 76  AGLAICGVVLQSLLRNPLADPYLLGISAGASTGAVLVAILGFGAGAI------------S 123

Query: 137 ITIFAFLGSLLGVCAVLILAKLKGLSPEA--MVLAGVAISSLFTAATT-LIQYFADDMQL 193
           ++  AF+G++     V +LA     +  A  ++LAG+A S LF A T+ LI   A   Q 
Sbjct: 124 MSAGAFVGAVAAFSLVALLAHSSRGTTAAGQIILAGIAGSQLFNALTSFLITKSASSEQA 183

Query: 194 AAMVYWSFGDLGRPLWPEVKIMAFVAFVSLIYFIHKRWDYNALESGEETAKSLGVNTDKI 253
             +++W  G+L    W  V +      V L+  +  R   +A   G ++A SLG+   ++
Sbjct: 184 RGIMFWLLGNLSGVRWHSVWLAVPTVLVGLLVCLWHRRALDAFTFGSDSAASLGIAVRRV 243

Query: 254 RLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPLCSIFGAVLVLLAD 313
           ++  +  A+LVT+V V+ +G IGFVGL+ PH +R+ VG  +  L+PL ++ GA+ ++ AD
Sbjct: 244 QIILITTAALVTAVMVSIVGSIGFVGLVIPHAVRMLVGVRHARLVPLSALSGALFLIAAD 303

Query: 314 TIARTIISPIILPVGILTSFLGAPMFLYLLTK 345
            ++RT+I    LP+G++T+ +GAP+F  +LT+
Sbjct: 304 ILSRTLIKGQALPIGVITALIGAPVFALILTR 335