Pairwise Alignments

Query, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 358 a.a., transport system permease protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  175 bits (443), Expect = 2e-48
 Identities = 113/335 (33%), Positives = 179/335 (53%), Gaps = 27/335 (8%)

Query: 22  LIIALIIISI----YSLCTGDFQLSISQ-----IINSLLGSGDASSNLVIWNIRLPRIFA 72
           L++ L +IS     Y +  G     ++      +  +L  S      +V+  IRLPRI  
Sbjct: 30  LVVTLTLISFAIGPYGVAPGKVLAILASRALPGLAQALSLSWTPEDEVVVMAIRLPRILG 89

Query: 73  AILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGGAESTGHIAIN 132
           A+L G  L+ SGA  Q + RNPL SP  +G + GA   A   ++ LG+GG    G     
Sbjct: 90  ALLVGAALATSGATFQGLFRNPLVSPDLLGAAAGAGCAAAAGLL-LGLGGPAIQG----- 143

Query: 133 NPYSITIFAFLGSLLGVCAVLILAKLKGLS---PEAMVLAGVAISSLFTAATTLIQYFAD 189
                   AFLG L  V    ++AK +G +   P  MVL G+ + ++F+A   LI+  AD
Sbjct: 144 -------LAFLGGLAAVGLTCLIAKGRGGAGDGPLMMVLTGLIVGTVFSAFIGLIKTLAD 196

Query: 190 -DMQLAAMVYWSFGDLGRPLWPEVKIMAFVAFVSLIYFIHKRWDYNALESGEETAKSLGV 248
            D  L A+ +W  G L      ++ + A      +      RW  NAL  G++ A++LG+
Sbjct: 197 PDNTLPAITFWLMGSLSAITLDDIALAAPPIGCGVGLACLLRWRLNALAFGDDEARALGI 256

Query: 249 NTDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPLCSIFGAVL 308
           +  ++RL+ ++ A+L+T+  VA  GIIG VGL+ PH+ R+ +G ++  L+P C++ G   
Sbjct: 257 DVGRVRLAAIVAATLMTAAAVAIAGIIGLVGLVVPHMTRMLLGPNHAVLLPACALLGGAF 316

Query: 309 VLLADTIARTIISPIILPVGILTSFLGAPMFLYLL 343
           +L  D +AR+ + P  +P+GILT+ +GAP+FL LL
Sbjct: 317 LLGVDDLARS-LGPTEIPLGILTALIGAPLFLALL 350