Pairwise Alignments

Query, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 342 a.a., transport system permease protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  192 bits (487), Expect = 1e-53
 Identities = 109/307 (35%), Positives = 175/307 (57%), Gaps = 15/307 (4%)

Query: 43  ISQIINSLLGSGDASSNL---VIWNIRLPRIFAAILCGIGLSVSGAVMQCVLRNPLASPY 99
           I  + N +LG+G A   +   +IWN R+ R   A  CG  L+VSG V+Q +L N LA PY
Sbjct: 42  IEVVANKVLGAGYALDPIDEGIIWNYRVARALVAASCGASLAVSGVVLQSLLLNALADPY 101

Query: 100 TMGISHGAMFGACVAIITLGIGGAESTGHIAINNPYSITIFAFLGSLLGVCAVLILAKLK 159
            +GIS GA  GA VA+  LG+GG             S+++ AFLG++L    V  +A   
Sbjct: 102 ILGISAGASSGA-VAVAVLGLGGGL----------VSLSVGAFLGAVLAFALVSFIALKA 150

Query: 160 GLSPEAMVLAGVAISSLFTAATT-LIQYFADDMQLAAMVYWSFGDLGRPLWPEVKIMAFV 218
           G  P A++LAG+A S LF A T+ ++   A   Q   +++W  G+L    WP+V +   V
Sbjct: 151 GRGPAAIILAGIAGSQLFNALTSFVVTKVATADQARGIMFWLLGNLSGVRWPDVSLAVPV 210

Query: 219 AFVSLIYFIHKRWDYNALESGEETAKSLGVNTDKIRLSGMLVASLVTSVCVAFLGIIGFV 278
           A   L+  +      +A   G ++A SLG+   ++ +  + +A+  T+  V+ +G IGFV
Sbjct: 211 ALGGLVICLFYARALDAFAFGADSAASLGIPVRRVYIMMIAIAAGTTATMVSIVGSIGFV 270

Query: 279 GLICPHIIRITVGGDYRYLIPLCSIFGAVLVLLADTIARTIISPIILPVGILTSFLGAPM 338
           GL+ PH+ R+TVG  +  ++P  ++ GA+ ++ AD ++R II   +LP+G++T+ +GAP 
Sbjct: 271 GLVIPHVARLTVGVRHNKVLPAAALIGAIFMIAADILSRKIIPGQVLPIGVMTALVGAPA 330

Query: 339 FLYLLTK 345
           F  +L +
Sbjct: 331 FALILMR 337