Pairwise Alignments

Query, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 347 a.a., transport system permease protein (RefSeq) from Shewanella loihica PV-4

 Score =  191 bits (485), Expect = 2e-53
 Identities = 120/336 (35%), Positives = 195/336 (58%), Gaps = 28/336 (8%)

Query: 24  IALIIISIYSLCT-------GDFQLSISQIINSLLGS------GDASSNLVIWNIRLPRI 70
           +A + + + +L T       G  Q+ +++++  LL        G  ++ ++I  +RLPRI
Sbjct: 18  LAFVCLGLLTLATPVLAVSFGAAQIGVAEVLEVLLAKLSGADPGGVTARILI-ELRLPRI 76

Query: 71  FAAILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITL-GIGGAESTGHI 129
             A + G GL+++GAV+Q V RNPLA PY  GIS GA  GA V I  L G+GGA ++   
Sbjct: 77  LLAFIAGFGLALAGAVLQTVTRNPLADPYLFGISSGASLGAVVVITLLGGVGGALAS--- 133

Query: 130 AINNPYSITIFAFLGSLLGVCAVLIL-AKLKGLSPEAMVLAGVAISSLFTAATTLIQYFA 188
                  + + AF+G+ L V  VL L  +      E M+L+GVAIS LF A  +L+ YF+
Sbjct: 134 -----VGLPLGAFIGASLAVLMVLALCGRDLNTQIERMLLSGVAISFLFGALASLMLYFS 188

Query: 189 DDMQLAAMVYWSFGDLGRPLWPEVKI-MAFVAFVSLIYFIHKRWDYNALESGEETAKSLG 247
                A++++WS G   +  W  + +    V   S I  + KR    A+++G+ETA +LG
Sbjct: 189 GPQSAASVLFWSLGSFAKASWQMLWLPWLLVLAASAILLLLKR-QILAIQAGDETAHTLG 247

Query: 248 VNTDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPLCSIFGAV 307
           +   ++RL  +L+ SL+T+V VA  G IGFVGL+ PH++R+ + G  R+ + L ++ G +
Sbjct: 248 IRVQRLRLVSLLLCSLITAVLVANCGGIGFVGLMVPHMVRLLLPG--RFALLLTALVGGL 305

Query: 308 LVLLADTIARTIISPIILPVGILTSFLGAPMFLYLL 343
            ++  D +AR ++S   LPVGI+T+ +G+  FL++L
Sbjct: 306 FMIWVDVLARCLLSYQELPVGIITAVIGSLFFLFIL 341