Pairwise Alignments

Query, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

Subject, 338 a.a., hemin ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  188 bits (477), Expect = 2e-52
 Identities = 115/334 (34%), Positives = 183/334 (54%), Gaps = 26/334 (7%)

Query: 22  LIIALIIISIYSLCTGDFQLSISQIINSL--------LGSGDASSNLVIWNIRLPRIFAA 73
           +++ LI+ SI S+  G   +S+   ++++        +G+      LV+ N+RLPR   A
Sbjct: 11  MMMLLILSSILSVSVGPVSISLMDSLSAVFNWATQQSIGNIAPHEQLVVSNVRLPRTLLA 70

Query: 74  ILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGGAESTGHIAINN 133
           +  G  L+  GAVMQ + RNPLA P  +G+S GA  GA + I+     G+          
Sbjct: 71  LTVGAILAQCGAVMQGLFRNPLADPGIIGVSSGAALGAAICIVLFPDVGS---------- 120

Query: 134 PYSITIFAFLGSLLGVCAVLILAKLK----GLSPEAMVLAGVAISSLFTAATTLIQYFAD 189
              I++ AFL    G+   LI+ +L     G S   ++L+GVAI++L  A   ++ Y A+
Sbjct: 121 -LMISLGAFL---CGLATTLIVYRLASNGLGTSVVLLLLSGVAIAALAGAGIGVLTYLAN 176

Query: 190 DMQLAAMVYWSFGDLGRPLWPEVKIMAFVAFVSLIYFIHKRWDYNALESGEETAKSLGVN 249
           DM L  +  W  G +    W  V +   V  +    F       NAL  GE  A+ LG+N
Sbjct: 177 DMALRDLTLWQMGSIAGAQWQYVGLCLLVLVLLSWRFQRDAMALNALLLGEAEARHLGIN 236

Query: 250 TDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPLCSIFGAVLV 309
            D+++L  +L+ +L   V VA  GIIGF+GL+ PH++R+ +G D++ L+P+ ++ GA L+
Sbjct: 237 VDRLKLRLILLCALGVGVSVAATGIIGFIGLVVPHLVRMILGPDHKRLLPMSALLGAALL 296

Query: 310 LLADTIARTIISPIILPVGILTSFLGAPMFLYLL 343
            LAD  ART + P  LPV ++T+ +GAP F++LL
Sbjct: 297 ALADIGARTFLPPAELPVSLVTALIGAPFFIFLL 330