Pairwise Alignments

Query, 373 a.a., iron ABC transporter substrate-binding protein from Methanococcus maripaludis S2

Subject, 354 a.a., Twin-arginine translocation pathway signal (NCBI) from Rhodospirillum rubrum S1H

 Score = 60.1 bits (144), Expect = 9e-14
 Identities = 70/306 (22%), Positives = 132/306 (43%), Gaps = 35/306 (11%)

Query: 42  DMVGRTVEIPADVQKIVCSGPGCLRLISYLNATDKLVGIEDFENTNLIGRPYRLAHPEFS 101
           D   R++ +PA +  ++ +GP     + Y  A D + G  D     L      L  P ++
Sbjct: 41  DDADRSLSLPAALGSVLPAGPVAAVWL-YTLAPDLMAGWPDA----LSADQRALIAPPYA 95

Query: 102 ELSVIGN----GGPQDINVGPDPEKVLNVMPEVIF-ITYIDSDN---ADELQKKTGIPVV 153
           +L V G     GG  ++      E + ++ P++I  +  +D      A+ +Q +TGI   
Sbjct: 96  DLPVRGRVALRGGTVNL------EALASLRPDLILDVGSLDPSYRSVAERVQGQTGIAYA 149

Query: 154 VLSYGALGNFKNDAIFNSLTLCGEILGKEERAEEVISFISNIQDDLDKRTSEIPDEEKPS 213
           ++  G       D +  +    G++LG+ +RA E+ ++ +  + ++ +R     D    +
Sbjct: 150 LIDGGL------DRVSQTYARLGDLLGRPQRAAELAAWANAERAEITRRLPTPADRPAIA 203

Query: 214 IYVGAIGNKGIHGIDSTEGSYPPFESLNTENIAKTASNEHIFISKEQLIEWNPEFIFIDE 273
           +Y G  G KG+    S   +    + L   N+        + IS E L+   PE I   +
Sbjct: 204 VYYGR-GAKGMESAASGAITTEVIDLLGARNVVAAGGRGLVTISPESLVVARPEVILATD 262

Query: 274 GGISIVYEDYEKNPDYYNSLDAFKNGNVYGI--LPFNY--YTTNIDTAMADSYYIGTILY 329
                 + D  +    + SL A + G +Y +  LPF +  Y   I+  +    ++  +LY
Sbjct: 263 QS----FLDALRGEPRWQSLPAVRAGRLYKVPALPFGWVDYPPAINRLLG-LRWLAKLLY 317

Query: 330 PEAFSD 335
           PEAF +
Sbjct: 318 PEAFPE 323