Pairwise Alignments

Query, 248 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

 Score =  107 bits (266), Expect = 3e-28
 Identities = 73/235 (31%), Positives = 114/235 (48%), Gaps = 19/235 (8%)

Query: 1   MLQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNI 60
           ML    L  K   +E++K+  L +E GE   L GPNGAGK+T    I+G    E   G I
Sbjct: 1   MLVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVG--LVEADAGRI 58

Query: 61  YFKGKDITDMPMHERAQLGIGISYQSPPAISGVRLETMINAISKRSDE--------EMEE 112
              G+D+T  PM+ RA+LG+G   Q P     + +   I  + +  D+        E+  
Sbjct: 59  ELDGRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELAS 118

Query: 113 MAKRLNIRHFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSGVDVENVELLGGI 172
           + + L I H   + L    SGGE +R E+ +  A  P +++ DEP +GVD  +V  +  I
Sbjct: 119 LLEELQITHVADQ-LGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRI 177

Query: 173 INHLLDKDRKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEILN 227
           + HL ++          G++IT           D+A++L +G +   G PD +LN
Sbjct: 178 VIHLKERG--------IGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLN 224