Pairwise Alignments

Query, 248 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 243 a.a., ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 96.3 bits (238), Expect = 5e-25
 Identities = 66/234 (28%), Positives = 119/234 (50%), Gaps = 19/234 (8%)

Query: 2   LQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNIY 61
           L+  +L+    +++++K++ L +  G+   L GPNGAGK+T    ++G  + +  +G+I+
Sbjct: 6   LKASNLAKSYKNRQVVKNVSLTVNTGQVVGLLGPNGAGKTTTFYMVVGLVQSD--KGSIH 63

Query: 62  FKGKDITDMPMHERAQLGIGISYQSPPAISGVRLETMINAI--------SKRSDEEMEEM 113
               D+T  PMH RA+ GIG   Q       + +   I A+        +   +E +E++
Sbjct: 64  INDDDLTLDPMHLRARKGIGYLPQEASIFRKLSVRDNIMAVLQMRKELNTDEREEALEQL 123

Query: 114 AKRLNIRHFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSGVDVENVELLGGII 173
            +  +I H  + +L +  SGGE +R E+ +  A NP  ++ DEP +GVD  +V  +  II
Sbjct: 124 LEEFHITHI-RDNLGMSLSGGERRRVEIARALAANPRFILLDEPFAGVDPISVIDIKKII 182

Query: 174 NHLLDKDRKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEILN 227
             L ++          G++IT           +KA+++  G +   GTP EIL+
Sbjct: 183 EQLKNRG--------LGVLITDHNVRETLDVCEKAYIVSHGDLIAEGTPAEILD 228