Pairwise Alignments

Query, 248 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 331 a.a., N-Acetyl-D-glucosamine ABC transport system, ATPase component (from data) from Phaeobacter inhibens DSM 17395

 Score = 81.3 bits (199), Expect = 2e-20
 Identities = 72/233 (30%), Positives = 109/233 (46%), Gaps = 20/233 (8%)

Query: 2   LQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNIY 61
           LQ+ ++    G  E+LKDI+L +E GE  V  GP+G GKSTLL  I G    +   G I 
Sbjct: 4   LQLTNVCKSFGPVEVLKDINLTVEDGEFVVFVGPSGCGKSTLLRVISG--LEDATAGEIS 61

Query: 62  FKGKDITDMPMHERAQLGIGISYQSPPAISGVRLETMINAISKRSDEEMEEMAKR----- 116
             G+ +T  P  +R   GI + +QS      + +   +    K+  +  EE+A R     
Sbjct: 62  IGGQTVTTTPPAKR---GIAMVFQSYALYPHLSVRENMALALKQERQPKEEIAARVAEAS 118

Query: 117 --LNIRHFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSGVDVENVELLGGIIN 174
             L++  +  R  +   SGG+ +R  + +   + P L +FDEP S +D          +N
Sbjct: 119 RMLSLEDYLDRRPS-ELSGGQRQRVAIGRAVVREPKLFLFDEPLSNLDA------ALRMN 171

Query: 175 HLLDKDRKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEILN 227
             L+  R   + + S + +TH   I      DK  VL DG I   GTP E+ N
Sbjct: 172 TRLEIARLHRQLSASMIYVTH-DQIEAMTLADKIVVLRDGRIEQVGTPMELYN 223