Pairwise Alignments

Query, 248 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

Subject, 243 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 98.2 bits (243), Expect = 1e-25
 Identities = 67/234 (28%), Positives = 117/234 (50%), Gaps = 19/234 (8%)

Query: 2   LQIEDLSVKVGDKEILKDIHLYIEKGESHVLFGPNGAGKSTLLNTILGNPKYEVVRGNIY 61
           L+ ++L+     ++++KD+ L ++ G+   L GPNGAGK+T    ++G  K +  +G+I+
Sbjct: 6   LKAQNLAKSYKSRQVVKDVSLTVKTGQVVGLLGPNGAGKTTTFYMVVGLVKSD--KGHIF 63

Query: 62  FKGKDITDMPMHERAQLGIGISYQSPPAISGVRLETMINAI--------SKRSDEEMEEM 113
               D+T  PMH RA+ GIG   Q       + +   I A+        S + +E +E++
Sbjct: 64  IDDDDLTADPMHLRARKGIGYLPQEASIFRKLTVHDNIMAVLQTRKELNSDQREEALEQL 123

Query: 114 AKRLNIRHFYQRDLNVGFSGGEVKRSELLQIFAQNPDLVMFDEPDSGVDVENVELLGGII 173
            +  +I H  +    +  SGGE +R E+ +  A NP  ++ DEP +GVD  +V  +  II
Sbjct: 124 LEEFHITHI-RDSQGMSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKKII 182

Query: 174 NHLLDKDRKPSERNKSGLIITHLGYILNFMEVDKAHVLLDGVIACSGTPDEILN 227
             L  +          G++IT           + A+++  G +   GTP EIL+
Sbjct: 183 EQLKSRG--------LGVLITDHNVRETLDVCEHAYIVSHGSLIAEGTPAEILD 228