Pairwise Alignments

Query, 723 a.a., heavy metal translocating P-type ATPase from Methanococcus maripaludis S2

Subject, 789 a.a., copper-translocating P-type ATPase (RefSeq) from Shewanella amazonensis SB2B

 Score =  406 bits (1043), Expect = e-117
 Identities = 253/732 (34%), Positives = 414/732 (56%), Gaps = 33/732 (4%)

Query: 4   KLKISGMTCAVCVKTIEKSVSKMDGVESIVVNLLDESAVINFDEKFVSIEDIGIKIERLG 63
           + ++ GMTCA C   +EK++ K+ GV S  VNL  E   I+  E   + + +   +   G
Sbjct: 71  QFEVKGMTCASCAGRVEKALMKISGVGSANVNLATEQVSISLLENITN-DTLVAAVRDAG 129

Query: 64  YEVLGIAEEIEELPDKEDELKEKLKK---IIVGAVFSIALFSMMY-----IEIPYKPYLA 115
           YE++   E  +  P ++  L    K    +I  A+ ++ L   M       +     +  
Sbjct: 130 YELITADEPAQSEPKQDKRLAFYQKDSWPVIGSAILTLPLVLPMIGMLFGADWMLPAFWQ 189

Query: 116 FLVSLPPLLYIALPIFKAGFNSFRVKSLNMDVMYSLGMGVAYISALLVTL---GLLPMNF 172
           +L++ P   Y     +KAG+++ +  S NMD++ ++G   AY  +L +     G      
Sbjct: 190 WLLATPVQFYFGSRFYKAGWSALKAGSGNMDLLVAIGTSAAYGLSLYLWYSFDGHHGAPH 249

Query: 173 MFYDTTIMLATLLTLGRYLEERAKGRTSEAIKKLMGLQVKTAKVIRNNEELEIPIENVIV 232
           ++++++  + TL+ LG+ LE+RAK RT++A+  L  L+  TA V+R+ +   +P   ++ 
Sbjct: 250 LYFESSAAVLTLVLLGKLLEKRAKRRTTDALHALENLKPTTATVLRDAQWQSMPAAQLVS 309

Query: 233 GDILLIRPGEKIAVDGTVFEGDSYVDESMITGEPIPNPKKKGDSVIGGTINKNGILKITA 292
           GD++ + PG++I VDG V +G S+VDE++I+GE IP  K     V GG++N +G+L+I A
Sbjct: 310 GDVVKVLPGDRIPVDGLVIKGSSHVDEALISGESIPLHKSLDQKVTGGSVNLDGVLEIKA 369

Query: 293 EKIGKDTVLSQIIQLVKNAQISKPDIQNLADKAVSYFIPVVFTIALISSLYW-FFNGGIL 351
             +G ++ LS+II+LV+ AQ +K  +Q L DK  S F+PVV  IA I+ L W  + G   
Sbjct: 370 TAVGSESTLSKIIRLVEQAQGAKAPVQALVDKISSIFVPVVLLIATITVLTWGLYFGDWS 429

Query: 352 LAVTTFISVMVIACPCALGLATPTAITVGVGRGAELGILIKDSKVFDVAGNLKCMIFDKT 411
             +   ++V+VIACPCALGLATP AI  G G  A  GIL+KD+   + A  +  ++FDKT
Sbjct: 430 QGILHAVAVLVIACPCALGLATPAAIMAGTGTAARHGILVKDAIALEQATKIDYVVFDKT 489

Query: 412 GTITKGEPEVDEIISDYSKEEVLL-IAGTLEKNSEHPLALAILKKAEELNISLSEPEKFE 470
           GT+T+G+PE+ +I +    E VLL  A  L+++SEHPLA A++  A    +SL E  +F 
Sbjct: 490 GTLTEGKPELVQITAFDDAENVLLEHAYGLQQHSEHPLAKAVISYAIRHQVSLPEVTQFT 549

Query: 471 SITGMGIIGTLKDLRVLIGNRRLMEENNISINEE----YNKEISRLEENAKTVIIVGVEN 526
            + G G+ G +   +++ G+   M E  +S+  +        IS L E     +I     
Sbjct: 550 VVAGKGVKGEIHGRKLMFGSSHWMRELGLSLPTDKIQIKGASISWLAELTDAGVI----- 604

Query: 527 KILGIIAISDKIKENAKITVQNLREIGIESYMVTGDNEKTAKVIGKEVGILENHVFSNVL 586
            + G+   +DK K  +K  V+ L++ GI+  M+TGD+  +A  I  E+  L+N+  + VL
Sbjct: 605 -LAGLFCFADKAKPESKQAVKALQQRGIKVAMLTGDSNDSAAQIAAELN-LDNYQ-AEVL 661

Query: 587 PEKKAEIVKSIKENAGGYVEFIGDGINDAPALSTADVGIAVGSGTDIAIESGEVVLMNDD 646
           P+ KAE V   ++  G  V  +GDGINDAPAL+ +D+GIA+ +GT++A+ +  + LM  +
Sbjct: 662 PQGKAEAVAQYQQQ-GFKVAMVGDGINDAPALAQSDLGIAMATGTEVAVSAAAITLMRGN 720

Query: 647 LKYVTGFVKLSKRVLKQIKLNLFWAFAYNSILIPVAAGALYSYNIRFEPELAAFAMTLSS 706
            + V   + L+    + I+ NLFWAFA+N++ IP+AA           P +A  AM  SS
Sbjct: 721 PELVASSLNLASATYRNIQQNLFWAFAFNTVGIPLAAMGY------LNPVIAGAAMACSS 774

Query: 707 ITIIGLSLLLKR 718
           + +I  +L L+R
Sbjct: 775 VLVISNALRLQR 786



 Score = 44.7 bits (104), Expect = 2e-08
 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 11/80 (13%)

Query: 5  LKISGMTCAVCVKTIEKSVSKMDGVESIVVNLLDESAVINFDEKFVSIEDIGIKIERLGY 64
          + + GMTC  C   IEK++ K++GV +  VNL  E+A I   E   S  DI   I   GY
Sbjct: 7  IAVKGMTCVSCASRIEKALLKVNGVVNATVNLATETATI---EGVASTGDIKSAIINAGY 63

Query: 65 EVLGIAEEIEELPDKEDELK 84
          +V        EL  ++ E+K
Sbjct: 64 DV--------ELESRQFEVK 75