Pairwise Alignments

Query, 301 a.a., CoB--CoM heterodisulfide reductase subunit B from Methanococcus maripaludis S2

Subject, 410 a.a., 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224 from Pseudomonas syringae pv. syringae B728a

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 59/270 (21%), Positives = 109/270 (40%), Gaps = 40/270 (14%)

Query: 13  GCIAPNRYPGIESATYKALDKLGIQLHPFEQASCCPAPGVFGSFDLMTWLTIAARNI--- 69
           GC+ P   P   SAT + LD+LGI +    QA CC A     +      L  A RNI   
Sbjct: 175 GCVQPGLSPNTNSATARVLDRLGIGIMAVSQAGCCGAVDYHLNAQ-QAGLDRARRNIDAW 233

Query: 70  -VMAEQADLDILTICNGCYGSLFEANHILQDNENARNKVNEVLSKHGLEYTGKSRVRHLT 128
               +     ++   +GC   + +  H+L+ +    +K  ++           +R + L 
Sbjct: 234 WPALQGGAESLIQTASGCGAFVKDYGHLLRHDPGYADKAEQI----------SARTKDLV 283

Query: 129 EVLYFDYGTEKIAERVERPLDINVAVHYGCHYLKPTDVKHIESSEVPKSLDGLVEAIGAK 188
           E+L  D   E +  + E  L    A H  C       ++H  + ++   ++ ++  +G  
Sbjct: 284 ELLR-DEPLETLGIKAETRL----AFHCPC------TLQH--AQKLGGEVERVLTRLGFN 330

Query: 189 SIYYKDKNMCCGAGGGVRARNPEVALEMAETKVKNIIAAGGDCVTEVCPFCHLQFDRGQI 248
                D ++CCG+ G      P +A ++ + ++ N + +G   V               I
Sbjct: 331 LTTVADGHLCCGSAGTYSITQPAIARQLRDNRM-NALESGKPQVIAT----------ANI 379

Query: 249 EMKETFGREYKLPVIHYAQLLGMAMGMTPK 278
             +       + PV H+ +L+  A+G TP+
Sbjct: 380 GCQTHLASAGRTPVRHWIELIDAALG-TPE 408