Pairwise Alignments

Query, 301 a.a., CoB--CoM heterodisulfide reductase subunit B from Methanococcus maripaludis S2

Subject, 433 a.a., glycolate oxidase subunit (Fe-S) protein from Synechococcus elongatus PCC 7942

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 63/265 (23%), Positives = 106/265 (40%), Gaps = 31/265 (11%)

Query: 12  LGCIAPNRYPGIESATYKALDKLGIQLHPFEQASCCPAPGVFGSFDLMTWLTIAARNIVM 71
           LGC+     P + +A  + L   G  +    Q  CC A  V      M      AR ++ 
Sbjct: 192 LGCVQRLFNPEVNAAAIRVLRANGCDVVIPPQQGCCGA--VAHHQGEMQQAQDLARAVIR 249

Query: 72  AEQAD-LD-ILTICNGCYGSLFEANHILQDNENARNKVNEVLSKHGLEYTGKSRVRHLTE 129
           + +A+ LD IL   +GC  +L     IL D+    ++  ++            RV+ + E
Sbjct: 250 SFEAENLDAILVTASGCGHTLKHYGAILADDPEWCDRAQQLAD----------RVQDVQE 299

Query: 130 VLYFDYGTEKIAERVERPLDINVAVHYGCHYLKPTDVKHIESSEVPKSLDGLVEAIGAKS 189
            L     T  +    E+PL   V     CH L    +++      P+ L  L +  G + 
Sbjct: 300 FLATVGLTTPLHPLQEQPLV--VVYQDACHMLHGQKIRN-----QPRQL--LQQIPGIEL 350

Query: 190 IYYKDKNMCCGAGGGVRARNPEVALEMAETKVKNIIAAGGDCVTEVCPFCHLQFDRG-QI 248
               D  +CCG+ G      P +A E+ + K +++   G   +      C++Q     Q 
Sbjct: 351 REPVDAQLCCGSAGIYNLLQPAIAAELGQQKARSLAETGAQMIASANIGCYVQIRHHLQA 410

Query: 249 EMKETFGREYKLPVIHYAQLLGMAM 273
           + K+       LPV+H  Q++  AM
Sbjct: 411 QSKD-------LPVLHPLQIIDRAM 428