Pairwise Alignments

Query, 301 a.a., CoB--CoM heterodisulfide reductase subunit B from Methanococcus maripaludis S2

Subject, 247 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 59/267 (22%), Positives = 101/267 (37%), Gaps = 29/267 (10%)

Query: 11  FLGCIAPNRYPGIESATYKALDKLGIQLHPFEQASCCPAPGV-FGSFDLMTWLTIAARNI 69
           F  C+     P +  AT   L+KLG Q+   +  +CC  P    G F+     T+   N 
Sbjct: 6   FTPCLVNQMMPEVAIATLSLLEKLGHQVIFPQGQTCCGQPMTNSGCFNEAKNTTLKLLNA 65

Query: 70  VMAEQADLDILTICNGCYGSLFEANHILQDNENARNKVNEVLSKHGLEYTGKSRVRHLTE 129
               + D  I+     C  +  E  H    +  A+  ++++                LTE
Sbjct: 66  FKGVECDA-IVCPAASCLVAAKENFHEFDKSPEAQAVIDKLYE--------------LTE 110

Query: 130 VLYFDYGTEKIAERVERPLDINVAVHYGCHYLKPTDVKHIESSEVPK--SLDGLVEAIGA 187
            L+          +  RP+   +++   CH ++  D+        P+   ++ L+  I  
Sbjct: 111 FLH----DVAPVTQFNRPVAKKLSLQLSCHGIRMLDLAAPSEYMGPRYNKMEALLSRIDG 166

Query: 188 KSIYYKDK-NMCCGAGGGVRARNPEVALEMAETKVKNIIAAGGDCVTEVCPFCHLQFDRG 246
             I Y ++ + CCG GG        V+ +M + K +     G D V    P C +  D G
Sbjct: 167 VEICYPERLDECCGFGGTFSVDEGAVSAKMGKDKAQAHANTGADYVVGFDPSCLMHLD-G 225

Query: 247 QIEMKETFGREYKLPVIHYAQLLGMAM 273
            I       R+  +   H AQ+L  A+
Sbjct: 226 TIRR-----RQLPIETRHLAQILNDAL 247