Pairwise Alignments

Query, 301 a.a., CoB--CoM heterodisulfide reductase subunit B from Methanococcus maripaludis S2

Subject, 247 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 49.7 bits (117), Expect = 7e-11
 Identities = 60/271 (22%), Positives = 103/271 (38%), Gaps = 37/271 (13%)

Query: 11  FLGCIAPNRYPGIESATYKALDKLGIQLHPFEQASCCPAPGV-FGSFDLMTWLTIAARNI 69
           F+ C+     P +  AT + L+KLG Q+   +  +CC  P    G FD     T+   N 
Sbjct: 6   FIPCLVNQMMPHVGIATVELLEKLGHQVILPKGQTCCGQPMTNSGCFDEAKKTTLKLLNA 65

Query: 70  VMAEQADLDILTICNGCYGSLFEANHILQDNENARNKVNEVLSKHGLEYTGKSRVRHLTE 129
               + D  I+     C  +  E  H   D+  A+  ++              ++  LTE
Sbjct: 66  FKGVECDA-IVCPAASCLVAAKENFHEFDDSPEAQAVID--------------KLYELTE 110

Query: 130 VLYFDYGTEKIAERVERPLDINVAVHYGCHYLKPTDVKHIESSEVPKSLDGLVEAI---- 185
            L+             +  +  +++   CH ++  D+        P++    VEA+    
Sbjct: 111 FLH----DVAPIPAFNKAFNFKISLQLSCHGIRMLDLATPSEQMGPRT--NKVEAVLSRI 164

Query: 186 -GAKSIYYKDKNMCCGAGGGVRARNPEVALEMAETKVKNIIAAGGDCVTEVCPFCHLQFD 244
            G + +Y   ++ CCG GG        V+ +M + K +   A G        P C L  D
Sbjct: 165 PGIEIVYPDRRDECCGFGGTFAVDEGAVSAKMGKDKAQAHAATGATYAVGFDPSCLLHLD 224

Query: 245 RGQIEMKETFGREYKLPVI--HYAQLLGMAM 273
            G I       R   LP+   H A+++  A+
Sbjct: 225 -GMI-------RRQLLPIATRHIAEVINAAL 247