Pairwise Alignments

Query, 301 a.a., CoB--CoM heterodisulfide reductase subunit B from Methanococcus maripaludis S2

Subject, 494 a.a., succinate dehydrogenase/fumarate reductase iron-sulfur subunit from Methanococcus maripaludis JJ

 Score = 84.0 bits (206), Expect = 7e-21
 Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 40/262 (15%)

Query: 10  FFLGCIAPNRYPGIESATYKALDKLGIQLHPFEQASCCPAPGV-FGSFDLMTWLTIAARN 68
           FF GC+   R   I  +  + L+  G+ +   +   CC +P +  G  D+    ++  +N
Sbjct: 267 FFTGCLVDFRLQEIGKSAIRVLNAHGVSVIIPKNQVCCGSPFIRTGQTDISE--SLKKQN 324

Query: 69  IVMAEQADLD-ILTICNGCYGSLFEANHILQDNENARNKVNEVLSKHGLEYTGKSRVRHL 127
           + +    ++D ++T+C GC GS  + ++  ++ E     + EVL K GL           
Sbjct: 325 LEIFNDLNVDSVVTLCAGC-GSTLKNDY--KEKEFKVMDITEVLVKVGL----------- 370

Query: 128 TEVLYFDYGTEKIAERVERPLDINVAVHYGCHYLKPTDVKHIESSEVPKSLDGLVEAIGA 187
                 DY          +PLDI V  H  CH  +   V ++E  ++ +S+  L      
Sbjct: 371 -----IDY----------KPLDITVTYHDPCHLRRGQKV-YLEPRKILESIPKL------ 408

Query: 188 KSIYYKDKNMCCGAGGGVRARNPEVALEMAETKVKNIIAAGGDCVTEVCPFCHLQFDRGQ 247
           K +  +  + CCGAGGGVR+  PEVA  + + K   I A   D +  VCPFC        
Sbjct: 409 KFLEMEIPDQCCGAGGGVRSGKPEVADAIGKRKANMIYATDADYLITVCPFCEYHIRDSL 468

Query: 248 IEMKETFGREYKLPVIHYAQLL 269
            +  +  G +  +PV++   LL
Sbjct: 469 TKYLKEHGLKKDIPVMNIISLL 490