Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 476 a.a., NAD-reducing hydrogenase HoxS beta subunit from Synechococcus elongatus PCC 7942

 Score = 60.1 bits (144), Expect = 1e-13
 Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 22/172 (12%)

Query: 6   IAIGPVHSTMLEPH-RLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKIC 64
           I I PV  T +E H ++ +F++D+   +A     V +RG E+  EG P  +   +  +IC
Sbjct: 5   IVIDPV--TRIEGHAKISVFLDDQGNAEAARFHVVEYRGFEKFCEGRPFTEMAGITARIC 62

Query: 65  GICSHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGH----------- 113
           GIC   HL +AA+  +    ++IP  A ++R ++   + + SH L F H           
Sbjct: 63  GICPVSHLLAAAKTGDKILAVQIPPAAENLRRLINLAQIIQSHALSFFHLSSPDFLLGWD 122

Query: 114 -------AFEILGHETMSMRC-FMLREPIMQVFFEISGSRVHYSCPIIGGIR 157
                   F ++  +  + R    LR+   Q+   + G ++H +  + GG+R
Sbjct: 123 SDPARRNLFGLIAADPETARAGIRLRQFGQQLIEWLGGRKIHAAWAVPGGVR 174