Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 394 a.a., NAD(P)H-quinone oxidoreductase subunit H from Synechococcus elongatus PCC 7942

 Score =  126 bits (317), Expect = 9e-34
 Identities = 108/383 (28%), Positives = 176/383 (45%), Gaps = 28/383 (7%)

Query: 8   IGPVHSTMLEPHRLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKICGIC 67
           +GP H +M    RL + ++ E V D E  IG  HRG+E++ E            +     
Sbjct: 15  MGPHHPSMHGVLRLIVTLDGENVIDCEPVIGYLHRGMEKIAENRSNVMFVPYVSRWDYAA 74

Query: 68  SHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGHAFEILGHETMSMRC 127
              +        E   NI +P+RA++IR+I+ EL R+ +H L  G     +G +T     
Sbjct: 75  GMFNEAITVNAPEKLANIPVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYI 134

Query: 128 FMLREPIMQVFFEISGSR-VHYSCPIIGGIRPRCNISETQIPHILDKISKYEEGLNKFLE 186
           F  RE I  ++   +G R ++ +   IGG+    ++    +   +D    ++  ++++  
Sbjct: 135 FRERELIYDLWEAATGQRLINNNYFRIGGVA--ADLPYGWLEKCIDFCDYFQAKVDEYER 192

Query: 187 RMLNDPMIISRVKDVGVMDRKTAAKFHAVGPTARGSNVKSDMRKWGWVPEYDPYDFDEIL 246
            + ++P+   RV+ +GV+ R+ A  +   GP  RGS VK D+R+      YD +D+D I 
Sbjct: 193 LITDNPIFRRRVEGIGVISREEALNWSLSGPMLRGSGVKWDLRRVDHYECYDDFDWDVIT 252

Query: 247 FDSGDVFARLAVRFYECLESVKIIRQA-----------LDALKDTSDKRI--YNPNYELH 293
            + GD FAR  VR  E  ES+KIIRQA           L+A +    K+   Y P+Y+ +
Sbjct: 253 AEEGDCFARYRVRVQEMRESLKIIRQACAGIPGGPYENLEARRMAEGKKSEWYGPDYQ-Y 311

Query: 294 EFKPINCYTEAQRGEQY--YSYGLDDEGLVRQA---------KIRTPTATNLGAMEDIVK 342
             K +    +   GE Y     G  + G+  Q          KIR P   NL  +  +++
Sbjct: 312 VSKKVAPTFKIPAGEHYVRLESGKGELGVFIQGADDICPWRFKIRAPDFNNLQILPQLLQ 371

Query: 343 GYHVSDAELIIASCDPCFTCTDR 365
           G  V+D   I+ S D      DR
Sbjct: 372 GVKVADIMAILGSIDVIMGSVDR 394