Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 567 a.a., hydrogenase large chain (RefSeq) from Shewanella amazonensis SB2B

 Score = 48.5 bits (114), Expect = 5e-10
 Identities = 26/109 (23%), Positives = 55/109 (50%), Gaps = 3/109 (2%)

Query: 6   IAIGPVHSTMLEPH-RLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKIC 64
           + I P+  T +E H R+ + +++  V     +     RG+E +++G       ++ ++IC
Sbjct: 5   VVIDPI--TRIEGHLRVEVEVDENNVIQNAWSSSTLWRGIEVILKGRTPMDVGLIVQRIC 62

Query: 65  GICSHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGH 113
           G+C++ H       VE    ++IP  A ++R +++    +H H + F H
Sbjct: 63  GVCTYSHYRCGTEAVENALGVKIPLNAKYLRSLMQTSLYMHDHIVHFYH 111