Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 486 a.a., coenzyme F420-reducing hydrogenase, alpha subunit from Dechlorosoma suillum PS

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 25/173 (14%)

Query: 6   IAIGPVHSTMLEPH-RLRLFIEDEI-VKDAELTIGVNHRGVERLMEGLPVEKACILCEKI 63
           +AI PV  + +E H ++ L ++D   V+   L I V  RG E+ ++G P  +  ++ +++
Sbjct: 16  VAIDPV--SRVEGHGKVTLLLDDHNQVQQVRLHI-VEFRGFEKFIQGRPYWEVPVMVQRL 72

Query: 64  CGICSHIHLWSAARLVEIGCN-IEIPERANHIRIIVEELERLHSHTLLFGHAF------- 115
           CGIC   H  +A++ +++      I   A  +R ++   + L SH L F H         
Sbjct: 73  CGICPVSHHLAASKALDLVVGAASITPTAEKMRRLMHYGQMLQSHALHFFHLSSPDLLFG 132

Query: 116 --------EILG----HETMSMRCFMLREPIMQVFFEISGSRVHYSCPIIGGI 156
                    I+G    H  ++ +  +LR+   +V    SG R+H +  + GG+
Sbjct: 133 FDSDVGQRNIVGVAAAHPEVAKQGILLRKFGQEVIRVTSGKRIHGTGAVPGGV 185