Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 567 a.a., quinone-reactive Ni/Fe hydrogenase, large subunit (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 48.1 bits (113), Expect = 6e-10
 Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 3/109 (2%)

Query: 6   IAIGPVHSTMLEPH-RLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKIC 64
           + I P+  T +E H R+ + +++  V +   +     RG+E +++G       ++ ++IC
Sbjct: 5   VVIDPI--TRIEGHLRIEVEVDENNVINKAWSSSTLWRGIEVILKGRTPMDVGLIVQRIC 62

Query: 65  GICSHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGH 113
           G+C++ H       VE    I+IP  A ++R ++     +H H + F H
Sbjct: 63  GVCTYSHYRCGTEAVENALGIQIPLNAKYLRSLMLTSLFMHDHIVHFYH 111