Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 598 a.a., NADH-quinone oxidoreductase subunit C/D from Klebsiella michiganensis M5al

 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 91/389 (23%), Positives = 167/389 (42%), Gaps = 39/389 (10%)

Query: 8   IGPVHSTMLEPHRLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKICGIC 67
           +GP H +     R+ L ++ E + D    IG +HRG E++ E           ++I  + 
Sbjct: 218 LGPNHPSAHGAFRIILQLDGEEIIDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 277

Query: 68  SHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGHAFEILGHETMSMRC 127
             ++       VE    I +P+R N IR+++ EL R++SH L      + +G  T     
Sbjct: 278 GCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 337

Query: 128 FMLREPIMQVFFEISGSRVHYSCPIIGGIRPRCNISETQIPHILDKISK-----YEEGLN 182
           F  R+ I  +   I+G R+H +   IGG+          +P   D++ +       + L+
Sbjct: 338 FTDRQKIYDLVEAITGFRMHPAWFRIGGV-------AHDLPRGWDRLLREFLEWMPKRLD 390

Query: 183 KFLERMLNDPMIISRVKDVGVMDRKTAAKFHAVGPTARGSNVKSDMRKWGWVPEYDPYDF 242
            + +  L + ++I R K V   + K A ++   G   R + +  D+RKW     Y+ +DF
Sbjct: 391 SYEKAALRNTILIGRSKGVAAYNAKEALEWGTTGAGLRATGIGFDVRKWRPYSGYENFDF 450

Query: 243 DEILFDSG--DVFARLAVRFYECLESVKIIRQALDALKD---TSDKRIYNPNYELHEFKP 297
            EI    G  D + R+ ++  E  +S++I++Q LD + +    +D  +  P  +    + 
Sbjct: 451 -EIPTGGGVSDCYTRVMLKVEELRQSLRILQQCLDNMPEGPFKADHPLTTPPPKERTLQH 509

Query: 298 INC---------------------YTEAQRGEQYYSYGLDDEGLVRQAKIRTPTATNLGA 336
           I                         EA +G   Y    D   +  + ++RTP+  +L  
Sbjct: 510 IETLITHFLQVSWGPVMPAQESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQ 569

Query: 337 MEDIVKGYHVSDAELIIASCDPCFTCTDR 365
           +   ++G  VSD  + + S D   +  DR
Sbjct: 570 IPAAIRGSLVSDLIVYLGSIDFVMSDVDR 598