Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 510 a.a., periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 47.8 bits (112), Expect = 7e-10
 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 4/109 (3%)

Query: 6   IAIGPVHSTMLEPH-RLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKIC 64
           IAI PV  T +E H +  + +E+  V DA L+ G+ +RG E ++ G     A  + ++IC
Sbjct: 19  IAIDPV--TRIEGHLKAEVVVENGKVVDARLSGGM-YRGFETILRGRDPRDASQIVQRIC 75

Query: 65  GICSHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGH 113
           G+C   H  ++   ++     ++P      R ++     L SH L F H
Sbjct: 76  GVCPTAHSTASVLALDEAFGAKVPNNGRITRNLIFGANYLQSHILHFYH 124