Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 549 a.a., periplasmic [NiFe] hydrogenase, large subunit, isozyme 2 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 51.6 bits (122), Expect = 5e-11
 Identities = 30/113 (26%), Positives = 60/113 (53%), Gaps = 4/113 (3%)

Query: 2   YEGEIAIGPVHSTMLEPH-RLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILC 60
           + G I I P+  T +E H ++ + ++D  V +A  +  +  RG+E +++G P E      
Sbjct: 6   FTGPITIDPI--TRIEGHLKIDVDVKDGKVANAWSSAQL-FRGIEMIVQGRPPEDVHHYV 62

Query: 61  EKICGICSHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGH 113
           +++CG+C+  H  ++ R VE    ++ P  A  +R+++     +H H + F H
Sbjct: 63  QRVCGVCTTTHALTSIRAVENAIGLKPPPAAELVRLLILSTLDVHDHLVHFYH 115