Pairwise Alignments

Query, 120 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 138 a.a., signal transduction protein (RefSeq) from Shewanella sp. ANA-3

 Score = 43.5 bits (101), Expect = 1e-09
 Identities = 29/122 (23%), Positives = 63/122 (51%), Gaps = 8/122 (6%)

Query: 3   VKDVMNENFLNVSPSDIVGEVVQSLYKNKKSYAPVIE-NGELVGWVTALD----LLTGCK 57
           ++D M+   + +  +  +   V+ L  N K  A V++ NG+LVG+++  D    +L    
Sbjct: 6   IRDHMDRQPVLLRANMSLATAVEKLLDNNKMGAAVVDDNGDLVGFLSQQDCLAVMLKSSY 65

Query: 58  HVKAEEAM--LFLDEIKIINPNDELTDELISEIIENEVFAYPVVENDKIIGTLSSFDILK 115
           H      +      E+  + P+D +  +L  +++ ++   YPVVE  K++GT++  ++L+
Sbjct: 66  HCDMTSVVKDCMRTEVLYVGPDDSIL-QLAEQMLGSKPKIYPVVEQGKVVGTINRTNVLR 124

Query: 116 KL 117
            +
Sbjct: 125 AM 126



 Score = 37.0 bits (84), Expect = 1e-07
 Identities = 16/52 (30%), Positives = 29/52 (55%)

Query: 2   IVKDVMNENFLNVSPSDIVGEVVQSLYKNKKSYAPVIENGELVGWVTALDLL 53
           +VKD M    L V P D + ++ + +  +K    PV+E G++VG +   ++L
Sbjct: 72  VVKDCMRTEVLYVGPDDSILQLAEQMLGSKPKIYPVVEQGKVVGTINRTNVL 123