Pairwise Alignments

Query, 352 a.a., uroporphyrinogen decarboxylase family protein from Methanococcus maripaludis S2

Subject, 354 a.a., uroporphyrinogen decarboxylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 72.8 bits (177), Expect = 1e-17
 Identities = 72/280 (25%), Positives = 130/280 (46%), Gaps = 28/280 (10%)

Query: 50  NAEVMAKSHIAGFEKFGYDLIYLFTNCSYLAEAMGQELVYFENEPASCRNPVVKNPED-- 107
           N E+  +  +    ++  D   LF++   + +AMG  L YFE    +   P  + P D  
Sbjct: 52  NHELACEVTLQPLRRYELDAAILFSDILTVPDAMGLGL-YFE----AGEGPRFERPTDTI 106

Query: 108 --ISKIKVAEGYEANLPVYYEAIELIQKEIGDRANVSVCFSGAFSTASTL-------RGH 158
             I K+ + +  E  L    +A+  I++E+  +  + + FSG+  T +T        +  
Sbjct: 107 DAIKKLSIPDP-EDELGYVMKAVSTIRRELNGQVPL-IGFSGSPWTLATYMVEGGSSKTF 164

Query: 159 EQFIKDTYNNPELCHELMKMATESAKNFITEVVKRGAIPIILEPLSSGSLISPRSFKQFS 218
           E+  K  Y  P   H L+    +S   ++   V  GA  +++   S G  +S  ++++FS
Sbjct: 165 EKIKKMAYAEPAALHMLLDKLADSVTLYLNAQVANGAQSLMIFD-SWGGALSHTAYREFS 223

Query: 219 KPYITELVDHAHEL--GTIIPLHICGKTTKI-IEQMSETGADVLSID-LCDLEIAKEKVS 274
             Y+ ++VD       G  +P+ +  K   + +E M+ETG D L +D   D+  A+ +V 
Sbjct: 224 LRYMQKIVDGLTRFADGRQVPVTLFTKGGGLWLEAMAETGCDALGLDWTVDIADARRRVG 283

Query: 275 GKSVILGNVSPSDDLLFGPVERIHESCKNLIETMNGYEPG 314
            K  + GN+ PS  +L+ P+ RI E    ++    GY  G
Sbjct: 284 HKVALQGNMDPS--MLYAPIPRIEEEVGQILA---GYGEG 318