Pairwise Alignments

Query, 352 a.a., uroporphyrinogen decarboxylase family protein from Methanococcus maripaludis S2

Subject, 338 a.a., methylcobamide:CoM methyltransferase mtbA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  102 bits (255), Expect = 1e-26
 Identities = 75/319 (23%), Positives = 147/319 (46%), Gaps = 4/319 (1%)

Query: 25  RIVTMPIVTSNTAQLIGKSQKEFQLNAEVMAKSHIAGFEKFGYDLIYLFTNCSYLAEAMG 84
           +++++PI+T    +LIGK+  +   N +V  ++  A  +K+      +  + +  AEA G
Sbjct: 18  KVISIPIMTHPGIELIGKTVHDAVTNGQVHYEAIKALCDKYPAAAATVIMDLTVEAEAFG 77

Query: 85  QELVYFENEPASCRNPVVKNPEDISKIKVAEGYEANLPVYYEAIELIQKEIGDRANVSVC 144
            E+++ ENE  S    ++ +   I  +++    +  +  Y +A  L  K I DR  ++ C
Sbjct: 78  AEIIFPENEVPSVSGRLLADEAAIDALEIPALNKGRIAQYLKANMLTAKNITDRPVLAGC 137

Query: 145 FSGAFSTASTLRGHEQFIKDTYNNPELCHELMKMATESAKNFITEVVKRGAIPIILEPLS 204
             G +S A  L    + +   Y N E  + L+   T+    +   +   G   +++   +
Sbjct: 138 I-GPYSLAGRLYDMSEIMMLIYINLEAANTLLHKCTDFIIRYCMALKATGVNGVVMAEPA 196

Query: 205 SGSLISPRSFKQFSKPYITELVDHAHELGTIIPLHICGKTTKIIEQMSETGADVLSI-DL 263
           +G L+S     Q+S  ++ E+V+   +    + LH CG T    + M  TGA      + 
Sbjct: 197 AG-LLSNEDCLQYSSVFVKEIVEKVQDDHFTVVLHNCGNTGNCTQAMVYTGAAAYHFGNK 255

Query: 264 CDLEIAKEKVSGKSVILGNVSPSDDLLFGPVERIHESCKNLIETMNGYEPGFILSTGCET 323
            ++E A ++V   ++ +GN+ P         E + ++   L+E    Y P F+LS+GC+ 
Sbjct: 256 INMEEALKEVPADALAMGNLDPVSLFKMSSPEEMKKATLQLLEATAAY-PNFVLSSGCDI 314

Query: 324 SDKVPMENIQALMDSARSY 342
               P+ NI A   +   +
Sbjct: 315 PPYTPLANINAFYTALEEF 333