Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 869 a.a., Aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99) from Pseudomonas fluorescens FW300-N2E2

 Score =  115 bits (288), Expect = 5e-30
 Identities = 121/458 (26%), Positives = 203/458 (44%), Gaps = 60/458 (13%)

Query: 4   TLAEKILAKASGNSE---VSPGDIVMAKVETAMVHDITGPLSVNTLKKEGISKVWDNEKI 60
           TLA+K++ KA G +E   V PG     K+ T    D TGP++ + LK       +  + +
Sbjct: 383 TLAQKMVGKACGLAEGQGVRPGTYCEPKMTTVGSQDTTGPMTRDELKDLACLG-FSADLV 441

Query: 61  VIPFDHQIPADSINAAENHILMRNFVKEQNIKHFYDIREGVCHQVLPEKGHIVPGTVVVG 120
           +  F H            H  + +F+  +         +G+ H  L     ++P TV  G
Sbjct: 442 MQSFCHTAAYPKPIDVTTHHTLPDFIMTRGGVSLRP-GDGIIHSWLNRM--LLPDTVGTG 498

Query: 121 ADSHTCTYGAFGAFATGI----GSTDMAAAFATGELWFKVPETLYFNITGELKPEVMSKD 176
            DSHT        F  GI    GS  +A A ATG +   +PE++     G++KP +  +D
Sbjct: 499 GDSHT-------RFPMGISFPAGSGLVAFAAATGVMPLDMPESILVRFKGKMKPGITLRD 551

Query: 177 VILSIIGMVGADGATY-----KAAQFAGNTVD-----NMTIASRMTMSNMAIEMGGKAGL 226
           ++ +I      +G        K   F+G  ++      +T+     +S+ + E       
Sbjct: 552 LVHAIPYFAIQNGLLTVEKKGKKNAFSGRILEIEGLEGLTLEQAFELSDASAERSAAGCT 611

Query: 227 IA-------------------------PDDKTINYVKNAMEANNTAKPFELVLGDKNAEF 261
           I                           D +T+     AMEA   A P +L+  D +AE+
Sbjct: 612 IKLSKESITEYLQSNITLLRWMIGEGYGDARTLERRAQAMEAW-IANP-QLMEADADAEY 669

Query: 262 EEKFEIDVSNL-EPVMACPHNVDNVKAVREVAGTPIDQVFIGSCTNGRLEDLRAALNVIE 320
            E  EID++++ EPV+  P++ D+ + +  VAG  ID+VFIGSC    +   RAA  +++
Sbjct: 670 AEVIEIDLADISEPVLCAPNDPDDARLLSSVAGEKIDEVFIGSCMT-NIGHFRAAGKLLD 728

Query: 321 KHGGISKDIRVVVTPASRSIMLEAIDEGLIKKFYQYGCVVTNPSCSACMGALYGLLGPGE 380
           +  G     R+ ++P ++    +  +EG    + + G  +  P CS CMG     + P  
Sbjct: 729 QVKG-QLPTRLWLSPPTKMDAHQLTEEGYYGIYGKAGARMEMPGCSLCMGN-QARVEPNS 786

Query: 381 VGIATSNRNFRGREGSLESDVYLASPITAAACAVKGEI 418
             ++TS RNF  R G   ++VYLAS   A+  ++ G +
Sbjct: 787 TVVSTSTRNFPNRLGD-GANVYLASAELASVASILGRL 823