Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 470 a.a., isopropylmalate isomerase large subunit (RefSeq) from Shewanella amazonensis SB2B

 Score =  214 bits (546), Expect = 3e-60
 Identities = 156/469 (33%), Positives = 230/469 (49%), Gaps = 53/469 (11%)

Query: 1   MAMTLAEKILAKASGNSEVSP-GDIVMAKVETAMVHDITGPLSVNTLKKEGISKVWDNEK 59
           MA TL EK+      +  V P G+  +  V+  +VH++T P + + LK  G   +   EK
Sbjct: 1   MAKTLYEKVW---DAHLVVEPAGEAPIIYVDRHLVHEVTSPQAFSGLKMAG-RPLRAVEK 56

Query: 60  IVIPFDHQIPADSINAAENHILMRNFVKE--QNIKHF----YDIR---EGVCHQVLPEKG 110
                DH     S +      + R  V+    N + F    YDI    +G+ H + PE G
Sbjct: 57  TFATMDHNTSTKSASLTALSPMARTQVETLADNCRDFNVRLYDIHHPNQGIVHVMGPELG 116

Query: 111 HIVPGTVVVGADSHTCTYGAFGAFATGIGSTDMAAAFATGELWFKVPETLYFNITGELKP 170
             +PGTV+V  DSHT T+GAFGA A GIG++++    AT  L     +T+   + G++  
Sbjct: 117 ITLPGTVIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLRQLKAKTMKIEVRGKVAD 176

Query: 171 EVMSKDVILSIIGMVGADGATYKAAQFAGNTVDNMTIASRMTMSNMAIEMGGKAGLIAPD 230
            + +KD++L+IIG +G DG T    +F G  + ++++  RMT+ NMAIEMG KAG++APD
Sbjct: 177 GITAKDIVLAIIGKIGMDGGTGYVVEFCGEAIRDLSMEGRMTLCNMAIEMGAKAGMVAPD 236

Query: 231 DKTINYVKNAMEA------NNTAKPFELVLGDKNAEFEEKFEIDVSNLEPVMACPHNVDN 284
           + T  Y++    A            +  +  D +A F+ +  ++ + + P +    N   
Sbjct: 237 ETTFAYLEGREFAPKGDAWQQALADWRELHTDADAVFDAEVVLEAAAIAPQLTWGTNPGQ 296

Query: 285 VKAVREVA--------------------------GTP-----IDQVFIGSCTNGRLEDLR 313
           V A+  V                           GTP     I++VFIGSCTN R+EDLR
Sbjct: 297 VVAIDGVVPNPADETNPVVRTSMEKALAYVDLTPGTPMTDIAINKVFIGSCTNSRIEDLR 356

Query: 314 AALNVIEKHGGISKDIRVVVTPASRSIMLEAIDEGLIKKFYQYGCVVTNPSCSACMGALY 373
           AA     K   ++  +  +V P S  + L+A  EGL K F + G     P CS C+    
Sbjct: 357 AAA-AQAKGRKVASGVTAIVVPGSGQVKLQAEAEGLDKIFLEAGFEWRLPGCSMCLAMND 415

Query: 374 GLLGPGEVGIATSNRNFRGREGSLESDVYLASPITAAACAVKGEIVDPR 422
             L  G+   +TSNRNF GR+G   S  +L SP  AAA AV G  VD R
Sbjct: 416 DRLEAGDRCASTSNRNFEGRQGR-GSRTHLVSPAMAAAAAVAGHFVDIR 463