Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 472 a.a., 3-isopropylmalate dehydratase large subunit region (NCBI) from Rhodospirillum rubrum S1H

 Score =  223 bits (568), Expect = 1e-62
 Identities = 150/442 (33%), Positives = 221/442 (50%), Gaps = 49/442 (11%)

Query: 29  VETAMVHDITGPLSVNTLKKEGISKVWDNEKIVIPFDHQIPAD--SINAAENHILMRNFV 86
           ++  +VH++T P +   L+  G  KV   E+ +   DH +P    S   A+    ++   
Sbjct: 29  IDRHLVHEVTSPQAFEGLRMTG-RKVRRPEQTLAVADHNVPTTDRSKGIADEESRIQVEA 87

Query: 87  KEQNIKHFY-------DIREGVCHQVLPEKGHIVPGTVVVGADSHTCTYGAFGAFATGIG 139
              N   F        DIR+G+ H V PE+G  +PG  +V  DSHT T+GAFGA A GIG
Sbjct: 88  LGSNTAEFGVPYLEMDDIRQGIVHIVGPEQGFTLPGATIVCGDSHTSTHGAFGALAFGIG 147

Query: 140 STDMAAAFATGELWFKVPETLYFNITGELKPEVMSKDVILSIIGMVGADGATYKAAQFAG 199
           ++++    AT  L  K  + +   I G L+P V +KD++L++IG +G  G T    +FAG
Sbjct: 148 TSEVEHVLATQTLLQKPAKDMLVRIDGALRPGVSAKDIVLAVIGRIGTAGGTGHVIEFAG 207

Query: 200 NTVDNMTIASRMTMSNMAIEMGGKAGLIAPDDKTINYVKNAMEANNTA------KPFELV 253
             +  +++  RMT+ NM IE G +AGLIAPD+ T  Y+K    A   A        ++ +
Sbjct: 208 EAIRGLSMEGRMTVCNMTIEGGARAGLIAPDEVTFEYLKGRPFAPKGAAWEAAISYWKTL 267

Query: 254 LGDKNAEFEEKFEIDVSNLEPVMACPHNVDNVKAV--------------REVA------- 292
             D+ A ++   E+D   +EP +    + +NV A+              R  A       
Sbjct: 268 KTDEGAVYDTVIEMDAGAIEPQVTWGTSPENVVALSGRVPDPAAEADPGRRAAIERALAY 327

Query: 293 -----GTP-----IDQVFIGSCTNGRLEDLRAALNVIEKHGGISKDIRVVVTPASRSIML 342
                G P     ID+VFIGSCTNGR+EDLRAA   I K   ++  +  +V P S  +  
Sbjct: 328 MDLKPGMPMTEVAIDKVFIGSCTNGRIEDLRAAA-AIAKGRKVAATVNAIVVPGSGLVKE 386

Query: 343 EAIDEGLIKKFYQYGCVVTNPSCSACMGALYGLLGPGEVGIATSNRNFRGREGSLESDVY 402
           +A  EGL + F + G     P CS C+      L PGE   +TSNRNF GR+G      +
Sbjct: 387 QAESEGLDQIFLEAGFEWREPGCSMCLAMNADKLAPGERCASTSNRNFEGRQGK-GGRTH 445

Query: 403 LASPITAAACAVKGEIVDPRDL 424
           L SP  A A A+ G++ D + L
Sbjct: 446 LVSPAVAVASAITGKLTDAQSL 467