Pairwise Alignments

Query, 424 a.a., 3-isopropylmalate dehydratase large subunit from Methanococcus maripaludis S2

Subject, 466 a.a., isopropylmalate isomerase large subunit (RefSeq) from Shewanella loihica PV-4

 Score =  217 bits (552), Expect = 7e-61
 Identities = 159/468 (33%), Positives = 230/468 (49%), Gaps = 51/468 (10%)

Query: 1   MAMTLAEKILAKASGNSEVSPGDIVMAKVETAMVHDITGPLSVNTLKKEGISKVWDNEKI 60
           MA TL EK+    S       G+  +  V+  +VH++T P + + LK  G  K+   EK 
Sbjct: 1   MAKTLYEKVWD--SHIVAAPEGEAPLIYVDRHLVHEVTSPQAFSGLKVAG-RKLRAPEKT 57

Query: 61  VIPFDHQIPADSINAAENHILMRNFVKE--QNIKHF----YDIR---EGVCHQVLPEKGH 111
               DH     S +      + R  V+   QN K F    YDI    +G+ H + PE G 
Sbjct: 58  FATMDHNTSTKSASLDALSPMARTQVETLAQNCKEFGVRLYDIHHKNQGIVHVMGPELGI 117

Query: 112 IVPGTVVVGADSHTCTYGAFGAFATGIGSTDMAAAFATGELWFKVPETLYFNITGELKPE 171
            +PGTV+V  DSHT T+GAFGA A GIG++++    AT  L     +T+   + G +   
Sbjct: 118 TLPGTVIVCGDSHTATHGAFGALAFGIGTSEVEHVMATQTLRQLKAKTMKIEVRGLVADG 177

Query: 172 VMSKDVILSIIGMVGADGATYKAAQFAGNTVDNMTIASRMTMSNMAIEMGGKAGLIAPDD 231
           + +KD++L+IIG +G DG T    +F G  +  +++  RMT+ NMAIEMG KAG+IAPD 
Sbjct: 178 ITAKDIVLAIIGKIGMDGGTGYVVEFCGEAIAALSMEGRMTVCNMAIEMGAKAGMIAPDQ 237

Query: 232 KTINYVKNAMEA------NNTAKPFELVLGDKNAEFEEKFEIDVSNLEPVMACPHNVDNV 285
            TI+Y++    A            ++ +  D++A F+    ++ S++ P +    N   V
Sbjct: 238 TTIDYLEGREFAPKGEAWQQAVAAWKALKSDEDAMFDAHVVLEASDIAPQLTWGTNPGQV 297

Query: 286 -----------------------KAVREVAGTP--------IDQVFIGSCTNGRLEDLRA 314
                                  KA+  VA TP        I++VFIGSCTN R+EDLR+
Sbjct: 298 VAIDQCVPNPEDETNPTVKASIEKALDYVALTPGTQMTDVSINKVFIGSCTNSRIEDLRS 357

Query: 315 ALNVIEKHGGISKDIRVVVTPASRSIMLEAIDEGLIKKFYQYGCVVTNPSCSACMGALYG 374
           A     K   ++  +  +V P S  +  +A  EGL K F   G     P CS C+     
Sbjct: 358 AAQQA-KGRKVAAGVTAIVVPGSGLVKEQAEAEGLDKIFIDAGFEWRLPGCSMCLAMNDD 416

Query: 375 LLGPGEVGIATSNRNFRGREGSLESDVYLASPITAAACAVKGEIVDPR 422
            L  G+   +TSNRNF GR+G   S  +L SP  AAA A+ G  VD R
Sbjct: 417 RLEAGDRCASTSNRNFEGRQGR-GSRTHLVSPAMAAAAAIAGHFVDIR 463